Factsheet for PGSC0003DMT400062773

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90172	Soybean	plastid	71.01	36.84
TraesCS2D01G534900.1	Wheat	cytosol	27.54	10.61
PGSC0003DMT400027550	Potato	cytosol	27.54	4.99
TraesCS2A01G533100.1	Wheat	cytosol	30.43	3.98
PGSC0003DMT400075972	Potato	cytosol	34.78	3.58
PGSC0003DMT400074204	Potato	cytosol	33.33	3.51
HORVU2Hr1G116970.2	Barley	plastid	30.43	3.47
PGSC0003DMT400075284	Potato	cytosol	30.43	3.13
TraesCS2B01G562600.1	Wheat	cytosol, nucleus, peroxisome, plastid	7.25	1.22
TraesCS2D01G535000.1	Wheat	cytosol	2.9	0.56
HORVU2Hr1G121100.1	Barley	cytosol	0.0	0.0
HORVU7Hr1G022870.1	Barley	endoplasmic reticulum	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400062773	EnsemblPlantsGene:PGSC0003DMG400024432	Gene3D:1.20.1280.170	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987
InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	PANTHER:PTHR12542	PANTHER:PTHR12542:SF78	PFAM:PF03081	PGSC:PGSC0003DMG400024432
SUPFAM:SSF74788	UniParc:UPI000295CC45	UniProt:M1C9J0	MapMan:35.1	:	:

Description

Exocyst subunit EXO70 A1 [Source:PGSC_GENE;Acc:PGSC0003DMG400024432]

Coordinates

chr00:-:28017320..28017844

Molecular Weight (calculated)

7881.5 Da

IEP (calculated)

8.522

GRAVY (calculated)

-0.259

Length

69 amino acids

Sequence
(BLAST)

1: MGVDGKNSSG VSRALVKERL KTFNIQFEDL HQRQSQWTVP DTELRESLRL AVAEVLLPAY RSIVFNMTC

Best Arabidopsis Sequence Match ( AT5G03540.2 )
(BLAST)

001: MSNKSFKSSD GVLNHANSLL AKAQSKLEEE FKQLLASYSK AVEPDRLFDG LPNSLRPSSD GDGGGKPHGG HHNDDAETAA YTLPILIPSR VLPLLHDLAQ
101: QMVQAGHQQQ LLQIYRDTRS FVLEESLKKL GVEKLSKEDV QRMQWEVLEA KIGNWIHFMR IAVKLLFAGE RQVCDQIFRG FDSLSDQCFA EVTVSSVSML
201: LSFGDAIARS KRSPEKLFVL LDMYEIMREL HTEIETIFKG KACLEIRDSA TGLTKRLAQT AQETFGDFEE AVEKDATKTA VLDGTVHPLT SYVINYVKFL
301: FDYQTTLKQL FLEFGNGDDS NSQLASVTMR IMQALQNNLD GKSKQYKDPA LTHLFLMNNI HYMVRSVRRS EAKDLLGDDW VQRHRRIVQQ HANQYKRVAW
401: TKILQSSSAQ GLTSSGGGSL EGGNSSGVSR GLLKERFKMF NMQFDELHQR QSQWTVPDTE LRESLRLAVA EVLLPAYRSF LKRFGPLVES GKNPQKYIKY
501: TAEDLERLLG ELFEGKSMNE PRR

Arabidopsis Description

ATEXO70A1Exocyst subunit exo70 family protein A1 [Source:UniProtKB/TrEMBL;Acc:F4KGM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.