Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G534900.1 | Wheat | cytosol | 31.25 | 92.18 |
| TraesCS2B01G562600.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 51.14 | 66.01 |
| HORVU2Hr1G116970.2 | Barley | plastid | 60.23 | 52.56 |
| PGSC0003DMT400062773 | Potato | cytosol | 3.98 | 30.43 |
| KRG90172 | Soybean | plastid | 6.82 | 27.07 |
| TraesCS6A01G119800.1 | Wheat | cytosol | 17.99 | 14.2 |
| TraesCS7A01G252600.1 | Wheat | cytosol | 4.73 | 14.12 |
| TraesCS7A01G424500.1 | Wheat | cytosol, plastid | 16.86 | 13.11 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G533100.1 | EnsemblPlantsGene:TraesCS2A01G533100 | Gene3D:1.20.1280.170 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0008150 | GO:GO:0009987 |
| InterPro:Cullin_repeat-like_dom_sf | InterPro:Exo70 | PANTHER:PTHR12542 | PANTHER:PTHR12542:SF19 | PFAM:PF03081 | SEG:seg |
| SUPFAM:SSF74788 | MapMan:22.6.3.1 | : | : | : | : |
Description
No Description!
Coordinates
chr2A:-:749092431..749094017
Molecular Weight (calculated)
59896.0 Da
IEP (calculated)
5.975
GRAVY (calculated)
-0.286
Length
528 amino acids
Sequence
(BLAST)
(BLAST)
001: MVHLEDDFRQ VLTSGTYLYP PNSLQESLHD CIAPFMRSFS FSSIPNLEDL SFSSFSTSPS GESRSYGTGY SSGPVCMEKV HMYLIDPEAS IYLKEIAELM
101: ILAGHAPNMC RDYGETRHNM LMQCLSLLGV QIEQKSHNNQ AEATANGACS MQLYEKNQKM WIQALRVVVS IVLPEERDAC AQIFGCDRKV EEDCFARATT
201: GCTGQLLAVG SMMTNVKVND QQYHKVPLLL QMHEELVKLQ PSINVLMSGD AKGVISEQAS LLLDKLGEEA SSLLLEFLNV YSNLKPCQHK VLDGDILPLT
301: RHVIIFIELL VEYNDTINHI LPRVEDDDEG KGKEQSTKRT KSRWERYVLM LLARLQLKVE ENAESYEDER MRYIFLMNNA MHVVKGSGSP DLSMSMGNDN
401: HQQLVIRVEQ YATAYLRASW TEALLQLSDH GVSKYSVNFG PGSVSQWMRK SMKNFNSAFG EISRVQTTWK VPNPQLRQHL RLIILQQVLN AYRTLLGRYD
501: CCLGKNPSKY IKYTPDDIEN HVLDLFEG
101: ILAGHAPNMC RDYGETRHNM LMQCLSLLGV QIEQKSHNNQ AEATANGACS MQLYEKNQKM WIQALRVVVS IVLPEERDAC AQIFGCDRKV EEDCFARATT
201: GCTGQLLAVG SMMTNVKVND QQYHKVPLLL QMHEELVKLQ PSINVLMSGD AKGVISEQAS LLLDKLGEEA SSLLLEFLNV YSNLKPCQHK VLDGDILPLT
301: RHVIIFIELL VEYNDTINHI LPRVEDDDEG KGKEQSTKRT KSRWERYVLM LLARLQLKVE ENAESYEDER MRYIFLMNNA MHVVKGSGSP DLSMSMGNDN
401: HQQLVIRVEQ YATAYLRASW TEALLQLSDH GVSKYSVNFG PGSVSQWMRK SMKNFNSAFG EISRVQTTWK VPNPQLRQHL RLIILQQVLN AYRTLLGRYD
501: CCLGKNPSKY IKYTPDDIEN HVLDLFEG
001: MATPETRGVD SDLETAEKII LRWDSTTSEE AKENLIFQSG GDREEVDRYL KAVDEVQRHI SSISISDEVK ATIQIAMARL EDELRNILIS QTSTFEPDSL
101: LLDSSLSSSS FASSSRTELE DDTCDDGNEE EEQQQVDLVL PDGSGSDSGS RRLSRSRRSN SKSTSSIREI DLVTPEAVSD LRSIAQRMIG AGYSRECVQV
201: YGNVRKSAME MIFKQLGIVK LGIGDVQRLD WEAVEVKIRR WIRAAKVCVR VVFASEKRLC EQIFEGTMEE TCFMEIVKTS ALQLFNFPEA ISISRRSPEK
301: LFKILDLHDA ITDLLPDMEE IFDSSSSESI LVQATEIQSR LAEAARGILT EFENAVFREP SVVPVPGGTI HPLTRYVMNY LNLISDYRET LIDLVMTKPC
401: RGLKCTNDRN DPDMDISELE GISPLALHMI WTMVMLQFNL EEKSLHYRDE PLSHIFVMNN VHYIVQKVKS SPELMELIGD KYLRKLTGIF RQAATKYQRA
501: TWVRVLNSLR DEGLHVSGSF SSGVSKSALR ERFKAFNTMF EEVHRIQSTW SVPDTQLREE LRISLSEHLI PAYRSFLGRF RGHIESGRHP ENYLKYSVEN
601: LETAVLDFFE GYTTAPHLRR SQ
101: LLDSSLSSSS FASSSRTELE DDTCDDGNEE EEQQQVDLVL PDGSGSDSGS RRLSRSRRSN SKSTSSIREI DLVTPEAVSD LRSIAQRMIG AGYSRECVQV
201: YGNVRKSAME MIFKQLGIVK LGIGDVQRLD WEAVEVKIRR WIRAAKVCVR VVFASEKRLC EQIFEGTMEE TCFMEIVKTS ALQLFNFPEA ISISRRSPEK
301: LFKILDLHDA ITDLLPDMEE IFDSSSSESI LVQATEIQSR LAEAARGILT EFENAVFREP SVVPVPGGTI HPLTRYVMNY LNLISDYRET LIDLVMTKPC
401: RGLKCTNDRN DPDMDISELE GISPLALHMI WTMVMLQFNL EEKSLHYRDE PLSHIFVMNN VHYIVQKVKS SPELMELIGD KYLRKLTGIF RQAATKYQRA
501: TWVRVLNSLR DEGLHVSGSF SSGVSKSALR ERFKAFNTMF EEVHRIQSTW SVPDTQLREE LRISLSEHLI PAYRSFLGRF RGHIESGRHP ENYLKYSVEN
601: LETAVLDFFE GYTTAPHLRR SQ
Arabidopsis Description
ATEXO70D2At1g54090 [Source:UniProtKB/TrEMBL;Acc:Q9SYG5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.