Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G562600.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 49.59 | 73.35 |
| TraesCS2D01G534900.1 | Wheat | cytosol | 20.33 | 68.72 |
| TraesCS2D01G535000.1 | Wheat | cytosol | 38.02 | 64.97 |
| TraesCS2A01G533100.1 | Wheat | cytosol | 52.56 | 60.23 |
| PGSC0003DMT400062773 | Potato | cytosol | 3.47 | 30.43 |
| KRG90172 | Soybean | plastid | 5.45 | 24.81 |
| HORVU6Hr1G021690.1 | Barley | cytosol | 16.36 | 17.25 |
| HORVU7Hr1G098020.1 | Barley | cytosol | 16.69 | 14.79 |
| HORVU7Hr1G052100.1 | Barley | cytosol | 14.05 | 12.13 |
| HORVU2Hr1G121100.1 | Barley | cytosol | 0.99 | 10.0 |
| HORVU7Hr1G022980.1 | Barley | cytosol | 3.64 | 9.13 |
| HORVU7Hr1G022870.1 | Barley | endoplasmic reticulum | 0.66 | 6.67 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G116970.2 | EnsemblPlantsGene:HORVU2Hr1G116970 | Gene3D:1.20.1280.170 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0008150 | GO:GO:0009987 |
| InterPro:Cullin_repeat-like_dom_sf | InterPro:Exo70 | PANTHER:PTHR12542 | PFAM:PF03081 | SEG:seg | SUPFAM:SSF74788 |
| UniParc:UPI000B46C130 | UniProt:A0A287JKG0 | MapMan:22.6.3.1 | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:739246222..739249416
Molecular Weight (calculated)
68402.6 Da
IEP (calculated)
7.051
GRAVY (calculated)
-0.210
Length
605 amino acids
Sequence
(BLAST)
(BLAST)
001: ALLATCFVSS RKSVTLPLQA AGNRRLRCRE LGLRRLEVAD EVVRRWASRG AAVEDSHGVS YSAGLSAAVK DLISLGSGGC LHALQAAIVH LEDDFHQVLS
101: SGTYLHPPSS LQESLHECIA PFMRSFSFSS IPNLEDLSFS SFSTSPNGES RSYGTGYSRG LVWMEKVHMY LIDPEASILL KEIAELMILA GHAPNMCRAY
201: GETRHNMLMR CLSLLDVQIE QKSYDNPAAA TANGACSMQL YEKNQKMWIQ ALKVFVSTIL PEERNSCAQI FGCDRKVEED CFARATTRCT GELLTFGSMM
301: ANVKVNDQQH HKVPLLLQMH EELLKLQPTI NNLMSGEAKG VISEQASMLL DKLGKEASSL LLEFLNVCSN LKPWQNTVLD GDILPLTQHV VGFVEQLNEY
401: SDMIDLILLL TVEKEDKEIT KSPWERYVLM LLARLQVKVE EKAESYKDER LRYIFLMNNA MHVLKGSGSS DLSMSMWDDQ NRQQFVIRVE QYATAYLRAS
501: WTGALFQLSD QAVPRELPYE IRSTNSVKKS MKKFNSALGE ISRVQTTWKV PNPQLRQHLR LVILQHVFPA YRAHLRRPRP GFHMEKHVKY TLDDIENHVL
601: DLFEG
101: SGTYLHPPSS LQESLHECIA PFMRSFSFSS IPNLEDLSFS SFSTSPNGES RSYGTGYSRG LVWMEKVHMY LIDPEASILL KEIAELMILA GHAPNMCRAY
201: GETRHNMLMR CLSLLDVQIE QKSYDNPAAA TANGACSMQL YEKNQKMWIQ ALKVFVSTIL PEERNSCAQI FGCDRKVEED CFARATTRCT GELLTFGSMM
301: ANVKVNDQQH HKVPLLLQMH EELLKLQPTI NNLMSGEAKG VISEQASMLL DKLGKEASSL LLEFLNVCSN LKPWQNTVLD GDILPLTQHV VGFVEQLNEY
401: SDMIDLILLL TVEKEDKEIT KSPWERYVLM LLARLQVKVE EKAESYKDER LRYIFLMNNA MHVLKGSGSS DLSMSMWDDQ NRQQFVIRVE QYATAYLRAS
501: WTGALFQLSD QAVPRELPYE IRSTNSVKKS MKKFNSALGE ISRVQTTWKV PNPQLRQHLR LVILQHVFPA YRAHLRRPRP GFHMEKHVKY TLDDIENHVL
601: DLFEG
001: MATPETRGVD SDLETAEKII LRWDSTTSEE AKENLIFQSG GDREEVDRYL KAVDEVQRHI SSISISDEVK ATIQIAMARL EDELRNILIS QTSTFEPDSL
101: LLDSSLSSSS FASSSRTELE DDTCDDGNEE EEQQQVDLVL PDGSGSDSGS RRLSRSRRSN SKSTSSIREI DLVTPEAVSD LRSIAQRMIG AGYSRECVQV
201: YGNVRKSAME MIFKQLGIVK LGIGDVQRLD WEAVEVKIRR WIRAAKVCVR VVFASEKRLC EQIFEGTMEE TCFMEIVKTS ALQLFNFPEA ISISRRSPEK
301: LFKILDLHDA ITDLLPDMEE IFDSSSSESI LVQATEIQSR LAEAARGILT EFENAVFREP SVVPVPGGTI HPLTRYVMNY LNLISDYRET LIDLVMTKPC
401: RGLKCTNDRN DPDMDISELE GISPLALHMI WTMVMLQFNL EEKSLHYRDE PLSHIFVMNN VHYIVQKVKS SPELMELIGD KYLRKLTGIF RQAATKYQRA
501: TWVRVLNSLR DEGLHVSGSF SSGVSKSALR ERFKAFNTMF EEVHRIQSTW SVPDTQLREE LRISLSEHLI PAYRSFLGRF RGHIESGRHP ENYLKYSVEN
601: LETAVLDFFE GYTTAPHLRR SQ
101: LLDSSLSSSS FASSSRTELE DDTCDDGNEE EEQQQVDLVL PDGSGSDSGS RRLSRSRRSN SKSTSSIREI DLVTPEAVSD LRSIAQRMIG AGYSRECVQV
201: YGNVRKSAME MIFKQLGIVK LGIGDVQRLD WEAVEVKIRR WIRAAKVCVR VVFASEKRLC EQIFEGTMEE TCFMEIVKTS ALQLFNFPEA ISISRRSPEK
301: LFKILDLHDA ITDLLPDMEE IFDSSSSESI LVQATEIQSR LAEAARGILT EFENAVFREP SVVPVPGGTI HPLTRYVMNY LNLISDYRET LIDLVMTKPC
401: RGLKCTNDRN DPDMDISELE GISPLALHMI WTMVMLQFNL EEKSLHYRDE PLSHIFVMNN VHYIVQKVKS SPELMELIGD KYLRKLTGIF RQAATKYQRA
501: TWVRVLNSLR DEGLHVSGSF SSGVSKSALR ERFKAFNTMF EEVHRIQSTW SVPDTQLREE LRISLSEHLI PAYRSFLGRF RGHIESGRHP ENYLKYSVEN
601: LETAVLDFFE GYTTAPHLRR SQ
Arabidopsis Description
ATEXO70D2At1g54090 [Source:UniProtKB/TrEMBL;Acc:Q9SYG5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.