CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400062773	Potato	cytosol	36.84	71.01
TraesCS2D01G534900.1	Wheat	cytosol	23.31	17.32
TraesCS2A01G533100.1	Wheat	cytosol	27.07	6.82
HORVU2Hr1G116970.2	Barley	plastid	24.81	5.45
KRH04947	Soybean	cytosol, endoplasmic reticulum	26.32	5.24
KRH16141	Soybean	cytosol	26.32	5.23
KRH44635	Soybean	cytosol	24.81	4.9
KRH47016	Soybean	cytosol	23.31	4.63
KRG88765	Soybean	cytosol	18.05	3.45
KRH05572	Soybean	cytosol	17.29	3.28
TraesCS2B01G562600.1	Wheat	cytosol, nucleus, peroxisome, plastid	7.52	2.44
TraesCS2D01G535000.1	Wheat	cytosol	4.51	1.69
HORVU2Hr1G121100.1	Barley	cytosol	0.0	0.0
HORVU7Hr1G022870.1	Barley	endoplasmic reticulum	0.0	0.0

Protein Annotations

Gene3D:1.20.1280.170	MapMan:35.1	EMBL:ACUP02012556	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	EnsemblPlantsGene:GLYMA_20G072900
GO:GO:0000145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0006887	GO:GO:0008150	GO:GO:0009987	UniProt:K7N232	EnsemblPlants:KRG90172	ProteinID:KRG90172
ProteinID:KRG90172.1	PFAM:PF03081	PANTHER:PTHR12542	PANTHER:PTHR12542:SF78	SUPFAM:SSF74788	UniParc:UPI000296E2E9
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:25724010..25726188

Molecular Weight (calculated)

14666.4 Da

IEP (calculated)

8.953

GRAVY (calculated)

-0.383

Length

133 amino acids

Sequence
(BLAST)

001: MSPHPPLILQ SLSIQGLISS SGGGGGSTAS GDAGSSGASR AIVKDRFKTF NTMFEELHQK QSQWTVPDTE LRESLILAVA EVLLPAYRSF VKRFGPLVEN
101: VKSTQRYVKY TAEDLERILG EFFEGKNMND NKR

Best Arabidopsis Sequence Match ( AT5G03540.1 )
(BLAST)

001: MAVDSRMDLL SERAVLMRAS LQKSQTITDN VVSILGSFDS RLSALETAMR PTQIRTHAIR KAHENIDRTL KAAEVILSQF DLLRQAETKV LKGPHEDLES
101: YLDAIAQLRK IIRYFMSNKS FKSSDGVLNH ANSLLAKAQS KLEEEFKQLL ASYSKAVEPD RLFDGLPNSL RPSSDGDGGG KPHGGHHNDD AETAAYTLPI
201: LIPSRVLPLL HDLAQQMVQA GHQQQLLQIY RDTRSFVLEE SLKKLGVEKL SKEDVQRMQW EVLEAKIGNW IHFMRIAVKL LFAGERQVCD QIFRGFDSLS
301: DQCFAEVTVS SVSMLLSFGD AIARSKRSPE KLFVLLDMYE IMRELHTEIE TIFKGKACLE IRDSATGLTK RLAQTAQETF GDFEEAVEKD ATKTAVLDGT
401: VHPLTSYVIN YVKFLFDYQT TLKQLFLEFG NGDDSNSQLA SVTMRIMQAL QNNLDGKSKQ YKDPALTHLF LMNNIHYMVR SVRRSEAKDL LGDDWVQRHR
501: RIVQQHANQY KRVAWTKILQ SSSAQGLTSS GGGSLEGGNS SGVSRGLLKE RFKMFNMQFD ELHQRQSQWT VPDTELRESL RLAVAEVLLP AYRSFLKRFG
601: PLVESGKNPQ KYIKYTAEDL ERLLGELFEG KSMNEPRR

Arabidopsis Description

ATEXO70A1Exocyst subunit exo70 family protein A1 [Source:UniProtKB/TrEMBL;Acc:F4KGM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.