Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
24351685
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g102500.2.1 | Tomato | cytosol | 89.15 | 89.15 |
| GSMUA_Achr3P24680_001 | Banana | mitochondrion | 14.55 | 35.26 |
| PGSC0003DMT400009054 | Potato | nucleus, plastid | 35.71 | 28.07 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400046938 | EnsemblPlantsGene:PGSC0003DMG400018228 | EntrezGene:102598318 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR35490 | PGSC:PGSC0003DMG400018228 | RefSeq:XP_006358497.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000296F9BD |
| UniProt:M1BJW1 | MapMan:35.2 | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400018228]
Coordinates
chr1:-:79210408..79215573
Molecular Weight (calculated)
42385.6 Da
IEP (calculated)
4.548
GRAVY (calculated)
-0.602
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTYTAIAFE NLLEPRVRKS YGKQVLNERN EEEKVVEDNE PPPAPANHIY ISPALYITPE PAPIPETSSG SLSPSPYLVN HKRRGGGEAF ANRKLDGLEE
101: VEQVNEKTDL DLDLNLNLEE ELAEENLFEE DEGFLDPRCD ALSVGSVNEV KGLDCRSYVS AQGEFFDADE DFSVEGSFLN GSTCGPNIEW ELRTTKLKLL
201: EEIERRKTAE NALNMMRCQW QNISTVLSQA GLTLPSPSDV IGDMQLDNAS IEQLYQEVVV SRFVAEAIGK GQARAEAELA AESILESKNQ EISRLRDRLR
301: YFEAVNHEMS QRNQEIIDVA RKQRQRKRTQ KKWLWSCIGL SAAIGVSVVA YKYLPQASKH QPSSYSNEST STGTHKIG
101: VEQVNEKTDL DLDLNLNLEE ELAEENLFEE DEGFLDPRCD ALSVGSVNEV KGLDCRSYVS AQGEFFDADE DFSVEGSFLN GSTCGPNIEW ELRTTKLKLL
201: EEIERRKTAE NALNMMRCQW QNISTVLSQA GLTLPSPSDV IGDMQLDNAS IEQLYQEVVV SRFVAEAIGK GQARAEAELA AESILESKNQ EISRLRDRLR
301: YFEAVNHEMS QRNQEIIDVA RKQRQRKRTQ KKWLWSCIGL SAAIGVSVVA YKYLPQASKH QPSSYSNEST STGTHKIG
001: MPTFSAIALD RMLEPGASTS VESVPSTTNL FYSKPPISKL EKGKGKLPNE RTVTRPLMSP ALYATPDAIP LPNSPSSFPP SPYIINHKSR GPPRLLKSSS
101: EANVVSSSHQ KTLEEETITA ETDVKVSPRR RSTSFSFPIT EVTEDDYSNG VHARTVGNYN FDGIVDGPVG NWSPLDGKSG NGKSELDNAA NGLERVNGLS
201: EPVPIKTDKE SESEDFYDPG ESASFTSNTD VEGDAGDESS QRLATPVGEF YDAWDELSTD SGMQSSVNNI ESELSEIRLS LLMEIEKRKQ TEEALEQMQI
301: HWQRLREQMA QVGLFVPIDP TASTNNMNLS EELRCQLEIA RFVSDSLGRG MAKAEVEMEM ESMLETKNFE ITRLSDRLHY YEAVNREMSQ RNQEAIEVAR
401: RERQKRKKRQ RWIWGSIAAT ITLGSAALAW SYIPAAKPSS EVSLKDE
101: EANVVSSSHQ KTLEEETITA ETDVKVSPRR RSTSFSFPIT EVTEDDYSNG VHARTVGNYN FDGIVDGPVG NWSPLDGKSG NGKSELDNAA NGLERVNGLS
201: EPVPIKTDKE SESEDFYDPG ESASFTSNTD VEGDAGDESS QRLATPVGEF YDAWDELSTD SGMQSSVNNI ESELSEIRLS LLMEIEKRKQ TEEALEQMQI
301: HWQRLREQMA QVGLFVPIDP TASTNNMNLS EELRCQLEIA RFVSDSLGRG MAKAEVEMEM ESMLETKNFE ITRLSDRLHY YEAVNREMSQ RNQEAIEVAR
401: RERQKRKKRQ RWIWGSIAAT ITLGSAALAW SYIPAAKPSS EVSLKDE
Arabidopsis Description
AT3g50910/F18B3_190 [Source:UniProtKB/TrEMBL;Acc:Q94BX2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.