Factsheet for Solyc04g081400.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plastid: 16761134

plastid: 20363867
plastid: 22908117
extracellular: 29876421

gfp PMID: 16761134 doi

M Kandel-Kfir, H Damari-Weissler, MA German, D Gidoni, A Mett, E Belausov, M Petreikov, N Adir, D Granot

Institute of Plant Sciences, Agricultural Research Organization, The Volcani Center, Bet Dagan, 50250, Israel.

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400025526	Potato	plastid	98.0	91.74
VIT_18s0001g14230.t01	Wine grape	plastid	80.96	83.3
Os07t0197100-01	Rice	cytosol	31.86	72.94
KRH05943	Soybean	plastid	72.55	72.4
KRH17426	Soybean	plastid	71.14	70.86
TraesCS2A01G005200.1	Wheat	mitochondrion	68.74	68.74
TraesCS2B01G016000.1	Wheat	mitochondrion, plastid	67.74	68.01
AT1G47840.1	Thale cress	plastid	63.93	64.71
TraesCS2D01G006600.1	Wheat	plastid	67.54	64.19
CDY06724	Canola	plastid	63.73	63.98
CDY20902	Canola	plastid	63.33	63.71
Bra015599.1-P	Field mustard	plastid	63.33	63.58
HORVU7Hr1G061890.1	Barley	cytosol	24.65	62.12
KRH04729	Soybean	cytosol	18.64	59.62
Solyc12g008510.1.1	Tomato	plastid	55.51	55.51
Solyc06g066440.2.1	Tomato	plastid	53.91	54.23
Solyc03g121070.2.1	Tomato	plastid	53.71	53.82
HORVU5Hr1G034070.1	Barley	cytosol	24.85	48.63
Solyc11g065220.1.1	Tomato	endoplasmic reticulum	49.7	48.53
AT1G47845.1	Thale cress	cytosol	17.84	47.85
Solyc02g091830.2.1	Tomato	plastid	39.88	40.53

Protein Annotations

KEGG:00010+2.7.1.1	KEGG:00051+2.7.1.1	KEGG:00052+2.7.1.1	KEGG:00500+2.7.1.1	KEGG:00520+2.7.1.1	KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1	MapMan:3.1.4.3	Gene3D:3.30.420.40	Gene3D:3.40.367.20	EMBL:DQ056862	GO:GO:0000166
GO:GO:0001678	GO:GO:0003674	GO:GO:0003824	GO:GO:0004340	GO:GO:0004396	GO:GO:0005488
GO:GO:0005524	GO:GO:0005536	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0008865	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0016773	GO:GO:0019158	GO:GO:0019725	GO:GO:0030246
GO:GO:0046835	GO:GO:0051156	InterPro:Hexokinase	InterPro:Hexokinase_C	InterPro:Hexokinase_N	InterPro:IPR001312
PFAM:PF00349	PFAM:PF03727	PRINTS:PR00475	PFscan:PS51748	PANTHER:PTHR19443	PANTHER:PTHR19443:SF5
UniProt:Q4PS96	SUPFAM:SSF53067	EnsemblPlantsGene:Solyc04g081400.2	EnsemblPlants:Solyc04g081400.2.1	UniParc:UPI000052F9AF	SEG:seg

Description

Phosphotransferase [Source:UniProtKB/TrEMBL;Acc:Q4PS96]

Coordinates

chr4:+:65392545..65396755

Molecular Weight (calculated)

53990.1 Da

IEP (calculated)

5.407

GRAVY (calculated)

-0.019

Length

499 amino acids

Sequence
(BLAST)

001: MSVTVSSPAV RSFHVSRSPH KTISRPRVII SAVRSTDSLG VAPILTKLQK DCATPLPVLR HVADAMADDM RAGLAVDGGS DLKMILSYVD TLPTGNEKGL
101: FYALDLGGTN FRVLRVQLGG KEERVVATEF EQVSIPQELM FATSEELFDF IASALGKFAQ KEGGNFELQQ GRTREIGFTF SFPVKQTSIR TGILIKWTKG
201: FAVSGTAGKD VVACLNEAME RRGMDMQVSA LVNDTVGTLA GARYWDDDAM VAVILGTGTN ACYVERVDAI PKLAKRMSKS PITIVNTEWG AFSNGLPLTE
301: FDREMDAESI NPGEQIFEKT ISGMYLGEIV RRVLVKMAKV GGLFGSSYVP EKLVTPFVLR TPDICAMQQD TSIDLEAVES VLYDVAGVKS DLSARKTVVD
401: ICDTIAKRGG RLAGAGIVGI LQKMEEDSKG LIFGKRTVVA MDGGLYEHYP QYRGYLQEAV TELLGSEISK NVVIEHSKDG SGIGAALLAA ANSKYEHDD

Best Arabidopsis Sequence Match ( AT1G47840.1 )
(BLAST)

001: MSLMFSSPVV TPALGSFTFS SRPRSNYIVM SAVRSNSAST CPILTKFQKD CATPTPYLRN VANAIADDMR DGLAVEGGGD LEMILTFVDA LPSGNEEGLF
101: YALDLGGTNF RVRSVQLGGK KERVLATESE QISISQKLMI GTSEELFGFI ASKLANFVAK EKPGRFLLEE GRKRELGFTF SFPVKQTSID SGTLSKWTKG
201: FKVSGMEGKN VVACLNEAME AHGLDMRVSA LVNDGVGTLA GARYWDEDVM VGVILGTGTN ACYVEQKHAI PKLRSKSSSG TTIINTEWGG FSKILPQTIF
301: DLEMDETSLN PGEHLYEKMI SGMYLGEIVR RVLLHMCETS DLFGHFAPAK LSTPLALRTE HLCKMQEDNT DDLRDVGSIL YDFLDVEANM NARRRVVEVC
401: DTVVKRGGRL AGAGIVAILE KIEKDTKRMG SGKRTVVAMD GALYEKYPQY RQYMQDALVE LLGHKLASHV AIKHTKDVSG LGAALLAATN SIY

Arabidopsis Description

HXK3Hexokinase-like 1 protein [Source:UniProtKB/Swiss-Prot;Acc:Q9FZG4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.