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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • plastid 3
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:secretory
EpiLoc:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:mitochondrion, plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:cytosol
mitochondrion: 16761134
plastid: 22908117
gfp PMID: 16761134 doi
M Kandel-Kfir, H Damari-Weissler, MA German, D Gidoni, A Mett, E Belausov, M Petreikov, N Adir, D Granot
Institute of Plant Sciences, Agricultural Research Organization, The Volcani Center, Bet Dagan, 50250, Israel.
msms PMID: 22908117 doi
C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech
Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.
PPI

Inferred distinct locusB in Crop

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400000795 Potato endoplasmic reticulum 95.19 95.19
Bra039025.1-P Field mustard cytosol 77.15 77.0
VIT_11s0016g03070.t01 Wine grape plastid 76.35 76.66
CDY35895 Canola plastid 76.75 76.6
KRH60208 Soybean endoplasmic reticulum 76.35 76.51
Bra036699.1-P Field mustard plastid 76.15 76.15
CDX82746 Canola cytosol 76.15 76.15
CDY03331 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 76.15 76.15
AT4G29130.1 Thale cress plastid 75.55 76.01
CDY48733 Canola plastid 75.95 75.95
KRH41490 Soybean endoplasmic reticulum 75.75 75.9
AT2G19860.1 Thale cress cytosol 75.35 74.9
KRH74246 Soybean plastid 73.95 74.4
KRH48988 Soybean nucleus 72.95 73.09
GSMUA_Achr3P16320_001 Banana plastid 73.15 73.0
GSMUA_Achr6P26380_001 Banana plastid 72.75 72.6
KRH74248 Soybean nucleus 70.74 71.17
Solyc03g121070.2.1 Tomato plastid 70.14 70.28
GSMUA_Achr3P31700_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 68.34 69.17
TraesCS1B01G366400.1 Wheat mitochondrion 68.14 68.97
TraesCS1D01G355200.2 Wheat plastid 67.54 68.36
Solyc06g066440.2.1 Tomato plastid 67.94 68.35
TraesCS1B01G355600.1 Wheat golgi 65.53 64.5
TraesCS1D01G344600.1 Wheat plastid 65.33 64.3
Os01t0742500-01 Rice mitochondrion 64.93 64.03
TraesCS1D01G123700.1 Wheat cytosol 59.32 63.93
Os05t0187100-02 Rice cytosol 59.32 63.93
EES03587 Sorghum plastid 64.73 63.83
HORVU0Hr1G001440.2 Barley cytosol, mitochondrion 66.33 63.65
EES19165 Sorghum cytosol 58.52 63.62
TraesCS1B01G142000.1 Wheat cytosol 58.92 63.5
Os05t0522500-01 Rice mitochondrion 64.13 63.12
TraesCS3B01G320500.1 Wheat endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 46.89 63.07
Zm00001d043511_P001 Maize mitochondrion 63.93 63.04
EES18534 Sorghum endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole 63.93 62.92
Zm00001d038792_P001 Maize plasma membrane 63.93 62.92
HORVU1Hr1G028200.1 Barley cytosol 58.12 62.63
TraesCS3D01G110300.2 Wheat cytosol 57.72 62.61
Zm00001d037689_P001 Maize cytosol, extracellular 57.52 62.53
TraesCS3B01G309700.3 Wheat plastid 63.53 62.52
Os01t0190400-01 Rice cytosol 57.31 62.45
TraesCS3D01G276000.3 Wheat plastid 63.13 62.13
TraesCS3B01G127500.1 Wheat cytosol 57.11 62.09
HORVU3Hr1G070690.1 Barley plasma membrane 63.13 61.89
Zm00001d010796_P001 Maize plasma membrane 63.13 61.89
TraesCS3D01G286000.1 Wheat mitochondrion, plastid 61.32 61.82
Os01t0722700-01 Rice plastid 35.67 60.54
EES03543 Sorghum endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 60.52 59.92
Zm00001d043607_P001 Maize plasma membrane 60.32 59.72
GSMUA_Achr8P27620_001 Banana plastid 69.94 59.05
Os05t0532600-01 Rice cytosol 15.83 58.52
HORVU1Hr1G075680.2 Barley plastid 52.3 56.99
Zm00001d039512_P010 Maize extracellular 56.51 56.06
Solyc04g081400.2.1 Tomato plastid 55.51 55.51
HORVU3Hr1G068620.6 Barley cytosol 60.92 55.47
Solyc11g065220.1.1 Tomato endoplasmic reticulum 56.31 54.99
EES00147 Sorghum cytosol 56.71 54.95
Os07t0446800-00 Rice plastid 54.31 54.42
GSMUA_Achr6P05500_001 Banana plastid 53.91 53.16
Bra031105.1-P Field mustard cytosol 13.63 51.52
TraesCS7A01G479500.1 Wheat cytosol, endoplasmic reticulum 9.62 47.06
Solyc02g091830.2.1 Tomato plastid 44.29 45.01
Os01t0722800-00 Rice cytosol, plasma membrane 0.0 0.0
Protein Annotations
KEGG:00010+2.7.1.1KEGG:00051+2.7.1.1KEGG:00052+2.7.1.1KEGG:00500+2.7.1.1KEGG:00520+2.7.1.1KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1MapMan:3.1.4.3Gene3D:3.30.420.40Gene3D:3.40.367.20GO:GO:0000166GO:GO:0001678
GO:GO:0003674GO:GO:0003824GO:GO:0004340GO:GO:0004396GO:GO:0005488GO:GO:0005524
GO:GO:0005536GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829
GO:GO:0005975GO:GO:0006091GO:GO:0006096GO:GO:0006139GO:GO:0008150GO:GO:0008152
GO:GO:0008865GO:GO:0009056GO:GO:0009058GO:GO:0009987GO:GO:0016301GO:GO:0016310
GO:GO:0016740GO:GO:0016773GO:GO:0019158GO:GO:0019725GO:GO:0030246GO:GO:0046835
GO:GO:0051156InterPro:HexokinaseInterPro:Hexokinase_CInterPro:Hexokinase_NInterPro:IPR001312UniProt:K4DBT9
PFAM:PF00349PFAM:PF03727PRINTS:PR00475PFscan:PS51748PANTHER:PTHR19443PANTHER:PTHR19443:SF52
SUPFAM:SSF53067EnsemblPlantsGene:Solyc12g008510.1EnsemblPlants:Solyc12g008510.1.1TMHMM:TMhelixUniParc:UPI000276956ASEG:seg
Description
Phosphotransferase [Source:UniProtKB/TrEMBL;Acc:K4DBT9]
Coordinates
chr12:-:1919482..1924150
Molecular Weight (calculated)
54182.7 Da
IEP (calculated)
5.874
GRAVY (calculated)
-0.015
Length
499 amino acids
Sequence
(BLAST)
001: MGKLVVGATV VCTAAVVCGV TVLLMKHRVK NSGEWGKVEA LLKDFEEKCA TPVEKLKQVA DAMTVEMQAG LASEGGSKLK MLISYVDNLP TGDEKGLFYA
101: LDLGGTNFRV MRVQLGGKEK RIVKHEVKEV SIPQNVMTGS SSEVLFDFIA TALAEFVATE GDDFHLPPGR QRELGFTFSF PVKQLSIASG TLIKWTKGFS
201: IEDVVGQDVV GELAKAMERA GLDVRVAALV NDTVGTLAGG RYNNPDVIAA VILGTGTNAA YVERAHAIPK WHGLLPKSGE MVINMEWGNF RSSHLPVTEY
301: DQNLDIESLN PGEQIYEKII SGMYLGEILR RVLCRMAEEA SLFGDYVPSK LKVPFVLRTP DMAAMHHDES ADLKVVGNKL KDILEVPNST LKMRKIVVEL
401: CDIITSRGAR LSAAGIVGIL KKLGRDTFKD GEKQRSVIAV DGALFEHYTK FRNCLKETMK ELLGDAADST VIELSNDGSG VGAALLAASH SQYTDLEES
Best Arabidopsis Sequence Match ( AT2G19860.1 )
(BLAST)
001: MGKVAVATTV VCSVAVCAAA ALIVRRRMKS AGKWARVIEI LKAFEEDCAT PIAKLRQVAD AMTVEMHAGL ASEGGSKLKM LISYVDNLPS GDETGFFYAL
101: DLGGTNFRVM RVLLGGKHDR VVKREFKEES IPPHLMTGKS HELFDFIVDV LAKFVATEGE DFHLPPGRQR ELGFTFSFPV KQLSLSSGTL INWTKGFSID
201: DTVDKDVVGE LVKAMERVGL DMLVAALVND TIGTLAGGRY TNPDVVVAVI LGTGTNAAYV ERAHAIPKWH GLLPKSGEMV INMEWGNFRS SHLPLTEYDH
301: SLDVDSLNPG EQILEKIISG MYLGEILRRV LLKMAEEAAF FGDIVPPKLK IPFIIRTPNM SAMHSDTSPD LKVVGSKLKD ILEVQTSSLK MRKVVISLCN
401: IIASRGARLS AAGIYGILKK IGRDATKDGE AQKSVIAMDG GLFEHYTQFS ESMKSSLKEL LGDEVSESVE VILSNDGSGV GAALLAASHS QYLELEDDSE
501: TS
Arabidopsis Description
HXK2Phosphotransferase [Source:UniProtKB/TrEMBL;Acc:A0A178VX81]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.