Factsheet for TraesCS1D01G355200.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

plastid: 22160430

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS6A01G186300.1
TraesCS6B01G218100.1
TraesCS6D01G173400.1
TraesCS7A01G362000.1
TraesCS7B01G265500.1
TraesCS7D01G361000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G29130.1	TraesCS6A01G186300.1	AT1G76030.1	21798944
AT4G29130.1	TraesCS6B01G218100.1	AT1G76030.1	21798944
AT4G29130.1	TraesCS6D01G173400.1	AT1G76030.1	21798944
AT4G29130.1	TraesCS7A01G362000.1	AT1G76030.1	21798944
AT4G29130.1	TraesCS7B01G265500.1	AT1G76030.1	21798944
AT4G29130.1	TraesCS7D01G361000.1	AT1G76030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G355200.1	Wheat	golgi	99.59	99.59
TraesCS1B01G366400.1	Wheat	mitochondrion	98.17	98.17
HORVU0Hr1G001440.2	Barley	cytosol, mitochondrion	95.94	90.96
Os05t0532600-01	Rice	cytosol	22.31	81.48
GSMUA_Achr3P16320_001	Banana	plastid	77.08	76.0
VIT_11s0016g03070.t01	Wine grape	plastid	75.66	75.05
GSMUA_Achr6P26380_001	Banana	plastid	75.05	74.0
GSMUA_Achr3P31700_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	72.82	72.82
TraesCS3D01G286000.1	Wheat	mitochondrion, plastid	72.01	71.72
Bra039025.1-P	Field mustard	cytosol	72.01	71.0
CDY35895	Canola	plastid	72.01	71.0
AT4G29130.1	Thale cress	plastid	71.4	70.97
KRH60208	Soybean	endoplasmic reticulum	71.2	70.48
CDX82746	Canola	cytosol	71.2	70.34
KRH41490	Soybean	endoplasmic reticulum	70.79	70.08
AT2G19860.1	Thale cress	cytosol	70.99	69.72
CDY48733	Canola	plastid	70.39	69.54
CDY03331	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	70.39	69.54
Bra036699.1-P	Field mustard	plastid	70.18	69.34
PGSC0003DMT400042598	Potato	plastid	69.57	69.15
VIT_09s0002g03390.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	69.57	68.88
Solyc06g066440.2.1	Tomato	plastid	68.97	68.55
KRH74246	Soybean	plastid	68.76	68.35
Solyc03g121070.2.1	Tomato	plastid	68.76	68.07
KRH48988	Soybean	nucleus	68.76	68.07
PGSC0003DMT400006474	Potato	mitochondrion	68.56	68.01
PGSC0003DMT400000795	Potato	endoplasmic reticulum	68.36	67.54
Solyc12g008510.1.1	Tomato	plastid	68.36	67.54
KRH74248	Soybean	nucleus	66.94	66.53
KRH44270	Soybean	endoplasmic reticulum	66.33	66.46
TraesCS1D01G123700.1	Wheat	cytosol	62.07	66.09
TraesCS1D01G344600.1	Wheat	plastid	67.75	65.88
TraesCS3D01G276000.3	Wheat	plastid	67.14	65.29
TraesCS3D01G110300.2	Wheat	cytosol	60.85	65.22
GSMUA_Achr8P27620_001	Banana	plastid	71.4	59.56
KRH47202	Soybean	cytosol	48.68	59.26
TraesCS3D01G475600.1	Wheat	plastid	53.14	51.78
TraesCS2D01G006600.1	Wheat	plastid	54.56	51.24
Bra031105.1-P	Field mustard	cytosol	12.78	47.73
TraesCS1D01G237400.1	Wheat	plastid	48.07	47.4

Protein Annotations

KEGG:00010+2.7.1.1	KEGG:00051+2.7.1.1	KEGG:00052+2.7.1.1	KEGG:00500+2.7.1.1	KEGG:00520+2.7.1.1	KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1	MapMan:3.1.4.3	Gene3D:3.30.420.40	Gene3D:3.40.367.20	GO:GO:0000166	GO:GO:0001678
GO:GO:0003674	GO:GO:0003824	GO:GO:0004396	GO:GO:0005488	GO:GO:0005524	GO:GO:0005536
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0016773	GO:GO:0019725	GO:GO:0030246	InterPro:Hexokinase	InterPro:Hexokinase_C	InterPro:Hexokinase_N
InterPro:IPR001312	PFAM:PF00349	PFAM:PF03727	PRINTS:PR00475	PFscan:PS51748	PANTHER:PTHR19443
PANTHER:PTHR19443:SF14	SUPFAM:SSF53067	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1D01G355200	EnsemblPlants:TraesCS1D01G355200.2	TIGR:cd00012
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:-:439879295..439883076

Molecular Weight (calculated)

53051.1 Da

IEP (calculated)

6.389

GRAVY (calculated)

-0.002

Length

493 amino acids

Sequence
(BLAST)

001: MRKAAVAAVA AAAAVGVALL ARRQMREAKR WGRADAVLRG LEERSAAPPA RLRQVADAMA VEMHAGLASE GGSKLGMIIS YVDSLPSGQE KGLFYALDLG
101: GTNFRVLRVQ LGGKEGRVVK QECDEISIPA HLMTGTSQEL FDFIAAALAK FVASEGEDFH LLEGRQRELG FTFSFPVKQS SIASGTLIKW TKGFSIDETV
201: GADVVAELSS ALDRQGLDMK VTALVNDTIG TLAGGRYDDN DVVAAVILGT GTNAAYVERA NAIPKWHGLL PKSGDMVINM EWGNFRSSHL PLTEFDQALD
301: AESLNPGEQI YEKLISGMYL GEIVRRVLLK MTEEASLFGD DIPPKLKIPF ILRTPHMSMM HHDTSPDLRT VGAKLKDVLG IQGTSLKTRR LVVDVCDIVA
401: KRGARLAAAG IHGVLKKLGR DIPGSDKHRT VIAMDGGLYE HYTIFSETLE NTLREMLGEE VSSSVVIKLA NDGSGIGAAL LAAAHSQYLE AEV

Best Arabidopsis Sequence Match ( AT4G29130.1 )
(BLAST)

001: MGKVAVGATV VCTAAVCAVA VLVVRRRMQS SGKWGRVLAI LKAFEEDCAT PISKLRQVAD AMTVEMHAGL ASDGGSKLKM LISYVDNLPS GDEKGLFYAL
101: DLGGTNFRVM RVLLGGKQER VVKQEFEEVS IPPHLMTGGS DELFNFIAEA LAKFVATECE DFHLPEGRQR ELGFTFSFPV KQTSLSSGSL IKWTKGFSIE
201: EAVGQDVVGA LNKALERVGL DMRIAALVND TVGTLAGGRY YNPDVVAAVI LGTGTNAAYV ERATAIPKWH GLLPKSGEMV INMEWGNFRS SHLPLTEFDH
301: TLDFESLNPG EQILEKIISG MYLGEILRRV LLKMAEDAAF FGDTVPSKLR IPFIIRTPHM SAMHNDTSPD LKIVGSKIKD ILEVPTTSLK MRKVVISLCN
401: IIATRGARLS AAGIYGILKK LGRDTTKDEE VQKSVIAMDG GLFEHYTQFS ECMESSLKEL LGDEASGSVE VTHSNDGSGI GAALLAASHS LYLEDS

Arabidopsis Description

HXK1Phosphotransferase [Source:UniProtKB/TrEMBL;Acc:Q0WLE0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.