Factsheet for TraesCS1D01G237400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G137900.1
TraesCS4B01G148100.1
TraesCS4D01G153300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G50460.1	TraesCS4A01G137900.1	AT4G26630.1	25387881
AT1G50460.1	TraesCS4B01G148100.1	AT4G26630.1	25387881
AT1G50460.1	TraesCS4D01G153300.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G234700.1	Wheat	mitochondrion, plastid	95.0	95.96
TraesCS1B01G248900.1	Wheat	mitochondrion, plastid	94.8	94.8
HORVU1Hr1G057760.1	Barley	plastid	91.6	91.6
OQU77891	Sorghum	plastid	75.8	75.65
Os05t0375100-00	Rice	mitochondrion	75.2	74.6
Zm00001d037861_P001	Maize	plastid	73.2	72.76
TraesCS3D01G475600.1	Wheat	plastid	62.2	61.46
GSMUA_Achr1P11390_001	Banana	plastid	59.6	59.13
GSMUA_AchrUn_...	Banana	cytosol	48.0	58.68
PGSC0003DMT400034299	Potato	endoplasmic reticulum	57.6	56.25
GSMUA_Achr11P...	Banana	endoplasmic reticulum	55.6	55.94
GSMUA_Achr8P29510_001	Banana	endoplasmic reticulum, mitochondrion	57.4	55.84
KRH77671	Soybean	plastid	55.6	55.82
Solyc11g065220.1.1	Tomato	endoplasmic reticulum	56.8	55.58
KRH27814	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	55.2	55.42
KRH29072	Soybean	plastid	55.8	55.36
KRH24099	Soybean	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	54.8	54.37
VIT_06s0061g00040.t01	Wine grape	plastid	56.2	53.73
CDY22797	Canola	plastid	50.0	50.2
Bra035821.1-P	Field mustard	plastid	50.2	49.7
Bra018850.1-P	Field mustard	plastid	49.4	49.6
AT1G50460.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	49.4	49.6
CDY37134	Canola	endoplasmic reticulum, extracellular	42.0	49.53
CDY25373	Canola	plastid	50.0	49.51
CDY29586	Canola	cytosol	40.2	49.39
CDY07303	Canola	plastid	49.0	49.2
Bra030490.1-P	Field mustard	plastid	49.0	49.2
CDY68234	Canola	endoplasmic reticulum, extracellular, mitochondrion	41.0	49.16
CDY24565	Canola	plastid	49.6	49.11
AT3G20040.1	Thale cress	plastid	49.0	48.8
CDY34475	Canola	cytosol	15.6	48.75
CDY03607	Canola	plastid	47.2	48.36
Bra014254.1-P	Field mustard	plastid	48.2	48.3
CDY45062	Canola	plastid	47.0	48.16
TraesCS1D01G355200.2	Wheat	plastid	47.4	48.07
CDY37135	Canola	plastid	8.8	47.31
TraesCS3D01G110300.2	Wheat	cytosol	43.2	46.96
TraesCS3D01G286000.1	Wheat	mitochondrion, plastid	45.4	45.86
TraesCS1D01G123700.1	Wheat	cytosol	42.0	45.36
CDY20557	Canola	extracellular, vacuole	11.6	44.62
TraesCS1D01G344600.1	Wheat	plastid	43.8	43.2
TraesCS3D01G276000.3	Wheat	plastid	42.4	41.81
TraesCS2D01G006600.1	Wheat	plastid	41.6	39.62
CDX81950	Canola	mitochondrion	6.4	34.04

Protein Annotations

KEGG:00010+2.7.1.1	KEGG:00051+2.7.1.1	KEGG:00052+2.7.1.1	KEGG:00500+2.7.1.1	KEGG:00520+2.7.1.1	KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1	MapMan:3.1.4.3	Gene3D:3.30.420.40	Gene3D:3.40.367.20	GO:GO:0000166	GO:GO:0001678
GO:GO:0003674	GO:GO:0003824	GO:GO:0004396	GO:GO:0005488	GO:GO:0005524	GO:GO:0005536
GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0016773
GO:GO:0019725	GO:GO:0030246	InterPro:Hexokinase	InterPro:Hexokinase_BS	InterPro:Hexokinase_C	InterPro:Hexokinase_N
InterPro:IPR001312	PFAM:PF00349	PFAM:PF03727	PRINTS:PR00475	ScanProsite:PS00378	PFscan:PS51748
PANTHER:PTHR19443	PANTHER:PTHR19443:SF19	SUPFAM:SSF53067	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1D01G237400	EnsemblPlants:TraesCS1D01G237400.1
TIGR:cd00012	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1D:-:326584487..326587575

Molecular Weight (calculated)

54604.7 Da

IEP (calculated)

4.912

GRAVY (calculated)

0.072

Length

500 amino acids

Sequence
(BLAST)

001: MGGAGWLRVA AAAGCAAVTC ALATAMVARR VVAWRRWLRA MAVLRDVEES FATPTERLQR VVNSLAVEMF AGLASEDASK VRMLLTCVDS LPDGSEEGIY
101: YAVDIGGTGF RFLKVQLGPG STIINQKIER QPVKKELMEG TSEDFFNSIA STLKNFIERE GDEGRALGFT FSFPVRQFSI TSGSLIRWTK EFSIEDAIGQ
201: DVAQCLNEAL ERNGLNLKVN ALMNNTVGTL ALGHYYDEDT IAAVIIGAGT NACYIERNEA ITKCQCLLTN SGQTVVNVEW GSFRPPQIPL TPYDICFYNE
301: TTNYYDQGFE KMISGVYLGE IARLVFHKMA QESDVFGTDV DGLAIPFILS TPCLAAIRED DSLDLKEVGS ILEEQLKIHN VPLKTRRLVQ RVCDIITQRA
401: ARLAAAGIVA ILQKLGRDGT LCGTTRVRSM TGVPKRSAIA IDGCLYKEYS VFREYLNEAV LEILGEEIAA TVVLKVVEEG SGMGAALIAA TYSSTRNNSI

Best Arabidopsis Sequence Match ( AT1G50460.1 )
(BLAST)

001: MGKVAVAFAA VAVVAACSVA AVMVGRRMKS RRKWRTVVEI LKELEDDCDT PVGRLRQVVD AMAVEMHAGL ASEGGSKLKM LLTFVDDLPT GREKGTYYAL
101: HLGGTYFRIL RVLLGDQRSY LDVQDVERHP IPSHLMNSTS EVLFNFLAFS LERFIEKEEN GSDSQGVRRE LAFTFSFPVK HTSISSGVLI KWTKGFEISE
201: MVGQDIAECL QGALNRRGLD MHVAALVNDT VGALSLGYYH DPDTVVAVVF GTGSNACYLE RTDAIIKCQG LLTTSGSMVV NMEWGNFWSS HLPRTSYDID
301: LDAESSNAND MGFEKMISGM YLGDIVRRVI LRMSEDSDIF GPISPVLSEP YVLRTNSVSA IHEDDTPELQ EVARILKDIG VSDVPLKVRK LVVKICDVVT
401: RRAGRLAAAG IAGILKKIGR DGSGGITSGR SRSEIQMQKR TVVAVEGGLY MNYTMFREYM EEALVEILGE EVSQYVVVKA MEDGSSIGSA LLVASLQS

Arabidopsis Description

HKL1Hexokinase-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS1]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.