CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, extracellular

Predictor Summary:

plastid 2
extracellular 2
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX89318
CDX94304
CDX97358

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G50460.1	CDX89318	AT4G26630.1	25387881
AT1G50460.1	CDX94304	AT4G26630.1	25387881
AT1G50460.1	CDX97358	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29586	Canola	cytosol	94.96	97.3
CDY37134	Canola	endoplasmic reticulum, extracellular	90.89	89.39
CDY07303	Canola	plastid	97.84	81.93
CDY22797	Canola	plastid	92.09	77.11
CDY45062	Canola	plastid	89.93	76.84
CDY03607	Canola	plastid	88.97	76.02
AT1G50460.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	90.65	75.9
CDY34475	Canola	cytosol	27.58	71.88
CDY20557	Canola	extracellular, vacuole	22.06	70.77
CDY24565	Canola	plastid	79.14	65.35
CDY25373	Canola	plastid	78.42	64.75
Os01t0940100-01	Rice	mitochondrion	51.56	60.22
GSMUA_AchrUn_...	Banana	cytosol	57.31	58.44
KRH77671	Soybean	plastid	69.54	58.23
KRH27814	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	69.06	57.83
KRH29072	Soybean	plastid	68.82	56.94
KRH24099	Soybean	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	68.35	56.55
PGSC0003DMT400034299	Potato	endoplasmic reticulum	68.11	55.47
VIT_06s0061g00040.t01	Wine grape	plastid	69.3	55.26
Solyc11g065220.1.1	Tomato	endoplasmic reticulum	67.39	54.99
GSMUA_Achr8P29510_001	Banana	endoplasmic reticulum, mitochondrion	62.11	50.39
GSMUA_Achr1P11390_001	Banana	plastid	59.71	49.4
GSMUA_Achr11P...	Banana	endoplasmic reticulum	58.75	49.3
HORVU3Hr1G105380.4	Barley	cytosol	56.35	48.96
Zm00001d042146_P002	Maize	mitochondrion, plastid	58.27	48.89
Zm00001d011889_P001	Maize	mitochondrion	57.07	47.89
TraesCS3A01G480900.1	Wheat	plastid	56.59	46.55
TraesCS3B01G525400.2	Wheat	plastid	56.12	46.25
TraesCS3D01G475600.1	Wheat	plastid	55.88	46.05
OQU77891	Sorghum	plastid	52.28	43.51
Os05t0375100-00	Rice	mitochondrion	52.04	43.06
Zm00001d037861_P001	Maize	plastid	51.56	42.74
HORVU1Hr1G057760.1	Barley	plastid	51.08	42.6
TraesCS1A01G234700.1	Wheat	mitochondrion, plastid	50.12	42.22
CDX82746	Canola	cytosol	50.12	41.88
CDY35895	Canola	plastid	50.12	41.8
TraesCS1B01G248900.1	Wheat	mitochondrion, plastid	49.64	41.4
OQU88184	Sorghum	mitochondrion, plastid	58.27	41.33
TraesCS1D01G237400.1	Wheat	plastid	49.16	41.0
CDY48733	Canola	plastid	48.92	40.88
CDY03331	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	48.92	40.88
CDY06724	Canola	plastid	45.8	38.43
CDY20902	Canola	plastid	45.08	37.9
CDX81950	Canola	mitochondrion	8.15	36.17
CDY49677	Canola	cytosol, mitochondrion, plastid	34.29	29.07
CDX90402	Canola	cytosol, mitochondrion, plastid	33.57	28.57
CDX75678	Canola	plastid	31.18	27.78
CDX69335	Canola	plastid	30.7	27.35
CDY37135	Canola	plastid	0.96	4.3

Protein Annotations

KEGG:00010+2.7.1.1	KEGG:00051+2.7.1.1	KEGG:00052+2.7.1.1	KEGG:00500+2.7.1.1	KEGG:00520+2.7.1.1	KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1	MapMan:3.1.4.3	Gene3D:3.30.420.40	Gene3D:3.40.367.20	GO:A0A078JN61	UniProt:A0A078JN61
EnsemblPlants:CDY68234	ProteinID:CDY68234	ProteinID:CDY68234.1	GO:GO:0000166	GO:GO:0001678	GO:GO:0003674
GO:GO:0003824	GO:GO:0004396	GO:GO:0005488	GO:GO:0005524	GO:GO:0005536	GO:GO:0005575
GO:GO:0005623	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0016773	GO:GO:0019725	GO:GO:0030246	GO:GO:0046835	EnsemblPlantsGene:GSBRNA2T00072069001
InterPro:Hexokinase	InterPro:Hexokinase_C	InterPro:Hexokinase_N	InterPro:IPR001312	PFAM:PF00349	PFAM:PF03727
PRINTS:PR00475	PFscan:PS51748	PANTHER:PTHR19443	PANTHER:PTHR19443:SF6	SUPFAM:SSF53067	UniParc:UPI0004EDE788
SEG:seg	:	:	:	:	:

Description

BnaCnng58160DPhosphotransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JN61]

Coordinates

chrLK037030:+:3..2787

Molecular Weight (calculated)

46033.5 Da

IEP (calculated)

6.360

GRAVY (calculated)

-0.024

Length

417 amino acids

Sequence
(BLAST)

001: WVKPFLLLIL TEKGTYYALH LGGTYFRILR VHLGGERSYL DVQDVERHPI PSHLMDSTSE VLFNFLAFSM ERFIEKEGKE SNSQGVKREL AFTFSFPVKH
101: SSISSGVLIK WTKGFEISEM VGKDVAECLQ GAMNRRGLDI HVAALVNDTV GALSLGYYHD PDTVVAVVFG TGSNACYLER TDAIIKSQGL LTTSGSMVVN
201: MEWGNFWSSH LPRTSYDIDL DAESSNPNDM GFEKMIAGLY LGDIVRRVIR HMSQVSDIFG PTSSMLSEPY VLRTNSVSAM HEDDTPELQQ VARILKDLGV
301: SDVPLKVRKL VVKICDVVTR RAGRLAAAGI AGILKKVGRD GSGGITSGRS RSEMRMQKRT VVAVEGGLYM NYTMFREYME EALVEILGEE VSQYVVVKAM
401: EDGSSIGSAL LVASLQS

Best Arabidopsis Sequence Match ( AT1G50460.3 )
(BLAST)

001: MFTSNHCCYL LPLLWREKGT YYALHLGGTY FRILRVLLGD QRSYLDVQDV ERHPIPSHLM NSTSEVLFNF LAFSLERFIE KEENGSDSQG VRRELAFTFS
101: FPVKHTSISS GVLIKWTKGF EISEMVGQDI AECLQGALNR RGLDMHVAAL VNDTVGALSL GYYHDPDTVV AVVFGTGSNA CYLERTDAII KCQGLLTTSG
201: SMVVNMEWGN FWSSHLPRTS YDIDLDAESS NANDMGFEKM ISGMYLGDIV RRVILRMSED SDIFGPISPV LSEPYVLRTN SVSAIHEDDT PELQEVARIL
301: KDIGVSDVPL KVRKLVVKIC DVVTRRAGRL AAAGIAGILK KIGRDGSGGI TSGRSRSEIQ MQKRTVVAVE GGLYMNYTMF REYMEEALVE ILGEEVSQYV
401: VVKAMEDGSS IGSALLVASL QS

Arabidopsis Description

HKL1Hexokinase-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS1]
SUBAcon: [mitochondrion,plastid,extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.