Factsheet for Zm00001d042146_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 22065420
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d013757_P010
Zm00001d033159_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G50460.1	Zm00001d013757_P010	AT4G26630.1	25387881
AT1G50460.1	Zm00001d033159_P001	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011889_P001	Maize	mitochondrion	95.37	95.37
Os01t0940100-01	Rice	mitochondrion	62.98	87.68
TraesCS3A01G480900.1	Wheat	plastid	82.5	80.87
TraesCS3B01G525400.2	Wheat	plastid	81.89	80.43
OQU88184	Sorghum	mitochondrion, plastid	94.77	80.1
TraesCS3D01G475600.1	Wheat	plastid	81.49	80.04
HORVU3Hr1G105380.4	Barley	cytosol	74.04	76.67
GSMUA_Achr1P11390_001	Banana	plastid	71.23	70.24
GSMUA_Achr8P29510_001	Banana	endoplasmic reticulum, mitochondrion	71.43	69.07
GSMUA_Achr11P...	Banana	endoplasmic reticulum	67.81	67.81
KRH77671	Soybean	plastid	67.0	66.87
KRH29072	Soybean	plastid	67.4	66.47
KRH27814	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	66.0	65.86
KRH24099	Soybean	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	66.6	65.67
GSMUA_AchrUn_...	Banana	cytosol	53.52	65.04
VIT_06s0061g00040.t01	Wine grape	plastid	67.4	64.05
Solyc11g065220.1.1	Tomato	endoplasmic reticulum	65.59	63.8
Zm00001d037861_P001	Maize	plastid	64.39	63.62
PGSC0003DMT400034299	Potato	endoplasmic reticulum	65.19	63.28
AT1G50460.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	60.97	60.84
CDY22797	Canola	plastid	60.76	60.64
CDY37135	Canola	plastid	11.27	60.22
CDY34475	Canola	cytosol	19.32	60.0
Bra018850.1-P	Field mustard	plastid	59.76	59.64
CDY37134	Canola	endoplasmic reticulum, extracellular	50.7	59.43
CDY20557	Canola	extracellular, vacuole	15.49	59.23
Bra014254.1-P	Field mustard	plastid	59.36	59.12
CDY03607	Canola	plastid	57.95	59.02
Bra030490.1-P	Field mustard	plastid	58.95	58.84
CDY07303	Canola	plastid	58.95	58.84
CDY45062	Canola	plastid	57.75	58.81
CDY29586	Canola	cytosol	47.89	58.48
CDY68234	Canola	endoplasmic reticulum, extracellular, mitochondrion	48.89	58.27
Bra035821.1-P	Field mustard	plastid	58.35	57.43
CDY24565	Canola	plastid	58.15	57.23
CDY25373	Canola	plastid	58.15	57.23
AT3G20040.1	Thale cress	plastid	57.55	56.97
Zm00001d037689_P001	Maize	cytosol, extracellular	48.29	52.29
Zm00001d043511_P001	Maize	mitochondrion	50.3	49.41
Zm00001d038792_P001	Maize	plasma membrane	49.5	48.52
Zm00001d043607_P001	Maize	plasma membrane	48.49	47.82
Zm00001d010796_P001	Maize	plasma membrane	48.89	47.74
Zm00001d039512_P010	Maize	extracellular	46.28	45.73
CDX81950	Canola	mitochondrion	7.65	40.43

Protein Annotations

KEGG:00010+2.7.1.1	KEGG:00051+2.7.1.1	KEGG:00052+2.7.1.1	KEGG:00500+2.7.1.1	KEGG:00520+2.7.1.1	KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1	EntrezGene:103650768	MapMan:3.1.4.3	Gene3D:3.30.420.40	Gene3D:3.40.367.20	UniProt:A0A1D6N1P8
GO:GO:0000166	GO:GO:0001678	GO:GO:0003674	GO:GO:0003824	GO:GO:0004396	GO:GO:0005488
GO:GO:0005524	GO:GO:0005536	GO:GO:0005575	GO:GO:0005623	GO:GO:0005975	GO:GO:0006091
GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016773	GO:GO:0019725
GO:GO:0030246	GO:GO:0046835	InterPro:Hexokinase	InterPro:Hexokinase_BS	InterPro:Hexokinase_C	InterPro:Hexokinase_N
InterPro:IPR001312	ProteinID:ONM34642.1	PFAM:PF00349	PFAM:PF03727	PRINTS:PR00475	ScanProsite:PS00378
PFscan:PS51748	PANTHER:PTHR19443	PANTHER:PTHR19443:SF6	SUPFAM:SSF53067	TMHMM:TMhelix	UniParc:UPI000221DFF7
EnsemblPlantsGene:Zm00001d042146	EnsemblPlants:Zm00001d042146_P002	EnsemblPlants:Zm00001d042146_T002	SEG:seg	:	:

Description

hexokinase4 hexokinase4

Coordinates

chr3:+:153564761..153570791

Molecular Weight (calculated)

53498.3 Da

IEP (calculated)

5.571

GRAVY (calculated)

0.019

Length

497 amino acids

Sequence
(BLAST)

001: MGRVGLGVAA GCAAATCAIA AALVARRAAA RSRWRRAVAL LREFEDGCAT PPPRLRQVVD AMVVEMHAGL ASDGGSKLKM LLTFVDALPA GNEEGTYYSI
101: DLGGTNFRVL KVEVGDGSVV TRRKVELPIP EELIKGTIEE LFNFVAVTLK EFVEAEDGKD EQRALGFTFS FPVRQTSVSS GSLIRWTKGF LIEDVVGKDV
201: AQCLNEALAR SGLNVRVTAL VNDTVGTLAL GHYHDEDTVA AVIIGAGTNA CYIERTDAII KCQGLLTNSG GMVVNMEWGN FWSSHLPRTP YDISLDDETQ
301: NRNDQGFEKM ISGIYLGEIA RLVLHRMALE SDVFGDAADN LSTPFTLSTP LLAAIRKDDS PDLSEVRRIL QDHLKIPDTP LKTRRLVVKV CDIVTRRAAR
401: LAAAGIVGIL KKLGRDGSGI ASSGRTRGQL RRTVVAIEGG LYEGYPEFRE YLDEALVEIL GEEVARTVTL EVTVDGSGAG AALLAAVHSS NRQQGSI

Best Arabidopsis Sequence Match ( AT1G50460.1 )
(BLAST)

001: MGKVAVAFAA VAVVAACSVA AVMVGRRMKS RRKWRTVVEI LKELEDDCDT PVGRLRQVVD AMAVEMHAGL ASEGGSKLKM LLTFVDDLPT GREKGTYYAL
101: HLGGTYFRIL RVLLGDQRSY LDVQDVERHP IPSHLMNSTS EVLFNFLAFS LERFIEKEEN GSDSQGVRRE LAFTFSFPVK HTSISSGVLI KWTKGFEISE
201: MVGQDIAECL QGALNRRGLD MHVAALVNDT VGALSLGYYH DPDTVVAVVF GTGSNACYLE RTDAIIKCQG LLTTSGSMVV NMEWGNFWSS HLPRTSYDID
301: LDAESSNAND MGFEKMISGM YLGDIVRRVI LRMSEDSDIF GPISPVLSEP YVLRTNSVSA IHEDDTPELQ EVARILKDIG VSDVPLKVRK LVVKICDVVT
401: RRAGRLAAAG IAGILKKIGR DGSGGITSGR SRSEIQMQKR TVVAVEGGLY MNYTMFREYM EEALVEILGE EVSQYVVVKA MEDGSSIGSA LLVASLQS

Arabidopsis Description

HKL1Hexokinase-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS1]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.