CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
EER91265
OQU91413

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G50460.1	EER91265	AT4G26630.1	25387881
AT1G50460.1	OQU91413	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011889_P001	Maize	mitochondrion	80.61	95.37
Zm00001d042146_P002	Maize	mitochondrion, plastid	80.1	94.77
Os01t0940100-01	Rice	mitochondrion	53.57	88.24
TraesCS3A01G480900.1	Wheat	plastid	69.73	80.87
TraesCS3B01G525400.2	Wheat	plastid	68.71	79.84
TraesCS3D01G475600.1	Wheat	plastid	68.37	79.45
HORVU3Hr1G105380.4	Barley	cytosol	61.9	75.83
GSMUA_Achr1P11390_001	Banana	plastid	60.54	70.63
GSMUA_Achr8P29510_001	Banana	endoplasmic reticulum, mitochondrion	60.54	69.26
GSMUA_Achr11P...	Banana	endoplasmic reticulum	57.65	68.21
KRH77671	Soybean	plastid	56.63	66.87
OQU77891	Sorghum	plastid	56.8	66.67
KRH29072	Soybean	plastid	56.97	66.47
KRH27814	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	55.78	65.86
GSMUA_AchrUn_...	Banana	cytosol	45.75	65.77
KRH24099	Soybean	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	56.29	65.67
VIT_06s0061g00040.t01	Wine grape	plastid	57.48	64.63
Solyc11g065220.1.1	Tomato	endoplasmic reticulum	55.44	63.8
PGSC0003DMT400034299	Potato	endoplasmic reticulum	55.44	63.67
CDY37135	Canola	plastid	9.69	61.29
CDY22797	Canola	plastid	51.53	60.84
AT1G50460.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	51.19	60.44
Bra018850.1-P	Field mustard	plastid	50.68	59.84
CDY37134	Canola	endoplasmic reticulum, extracellular	42.86	59.43
CDY34475	Canola	cytosol	16.16	59.38
Bra014254.1-P	Field mustard	plastid	50.34	59.32
CDY07303	Canola	plastid	50.17	59.24
Bra030490.1-P	Field mustard	plastid	50.17	59.24
CDY03607	Canola	plastid	49.15	59.22
CDY45062	Canola	plastid	48.98	59.02
CDY29586	Canola	cytosol	40.48	58.48
CDY20557	Canola	extracellular, vacuole	12.93	58.46
CDY68234	Canola	endoplasmic reticulum, extracellular, mitochondrion	41.33	58.27
CDY24565	Canola	plastid	49.15	57.23
Bra035821.1-P	Field mustard	plastid	49.15	57.23
CDY25373	Canola	plastid	48.98	57.03
AT3G20040.1	Thale cress	plastid	48.47	56.77
EES19165	Sorghum	cytosol	41.84	53.59
EES03587	Sorghum	plastid	42.86	49.8
EES03543	Sorghum	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	42.35	49.4
EES18534	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	41.84	48.52
EES00147	Sorghum	cytosol	39.29	44.85
CDX81950	Canola	mitochondrion	6.29	39.36

Protein Annotations

KEGG:00010+2.7.1.1	KEGG:00051+2.7.1.1	KEGG:00052+2.7.1.1	KEGG:00500+2.7.1.1	KEGG:00520+2.7.1.1	KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1	MapMan:3.1.4.3	Gene3D:3.30.420.40	Gene3D:3.40.367.20	UniProt:A0A1W0W1C5	GO:GO:0000166
GO:GO:0001678	GO:GO:0003674	GO:GO:0003824	GO:GO:0004396	GO:GO:0005488	GO:GO:0005524
GO:GO:0005536	GO:GO:0005575	GO:GO:0005623	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016773	GO:GO:0019725	GO:GO:0030246
GO:GO:0046835	InterPro:Hexokinase	InterPro:Hexokinase_BS	InterPro:Hexokinase_C	InterPro:Hexokinase_N	InterPro:IPR001312
EnsemblPlants:OQU88184	ProteinID:OQU88184	ProteinID:OQU88184.1	PFAM:PF00349	PFAM:PF03727	PRINTS:PR00475
ScanProsite:PS00378	PFscan:PS51748	PANTHER:PTHR19443	PANTHER:PTHR19443:SF6	EnsemblPlantsGene:SORBI_3003G421201	SUPFAM:SSF53067
TMHMM:TMhelix	UniParc:UPI0009DC86B9	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:72624829..72631511

Molecular Weight (calculated)

63501.6 Da

IEP (calculated)

6.691

GRAVY (calculated)

0.122

Length

588 amino acids

Sequence
(BLAST)

001: MGRVGLGVAA GCAAATCAIA AALVARRASA RARWRRAVAL LREFEEGCAT PTPRLRQVVD AMVVEMHAGL ASDGGSKLKM LLTFVDALPA GGGAVGRAFP
101: TYLAPNAACI ERCIPQWHCG LGRSLSDGNH CSGRHHLLLS KFIVLFWVAA LATAYNDSRT ICVTDGIHID LVGLLFFCFC HINEQGTYYS IDLGGTNFRV
201: LRVEVGAVSV VTSREVKLPI PEELTKGTIE ELFNFVAMTL KEFVETEDVK DEQRALGFTF SFPVRQTSVS SGSLIRWTKG FLIEDAVGKD VAQCLNEALA
301: RSGLNVRVTA LVNDTVGTLA LGHYYDEDTV AAVIIGAGTN ACYIERTDAI IKCQGLLTNS GGMVVNMEWG NFWSSHLPRT PYDISLDDET QNRNDQGFEK
401: MISGIYLGEI ARLVLHRMAL ESDVFGDAAD HLSTPFTLST PLLAAIRKDD SPDLSEVRRI LQEHLKIMDT PLKTRRLVVK VCDIVTRRAA RLAAAGIVGI
501: LKKLGRDGSG VASSGRTRGQ LRRTVVAIEG GLYEGYPVFR EYLDEALVEI LGEEVAQTVA LRVTEDGSGA GAALLAAVHS SNRQQGSI

Best Arabidopsis Sequence Match ( AT1G50460.1 )
(BLAST)

001: MGKVAVAFAA VAVVAACSVA AVMVGRRMKS RRKWRTVVEI LKELEDDCDT PVGRLRQVVD AMAVEMHAGL ASEGGSKLKM LLTFVDDLPT GREKGTYYAL
101: HLGGTYFRIL RVLLGDQRSY LDVQDVERHP IPSHLMNSTS EVLFNFLAFS LERFIEKEEN GSDSQGVRRE LAFTFSFPVK HTSISSGVLI KWTKGFEISE
201: MVGQDIAECL QGALNRRGLD MHVAALVNDT VGALSLGYYH DPDTVVAVVF GTGSNACYLE RTDAIIKCQG LLTTSGSMVV NMEWGNFWSS HLPRTSYDID
301: LDAESSNAND MGFEKMISGM YLGDIVRRVI LRMSEDSDIF GPISPVLSEP YVLRTNSVSA IHEDDTPELQ EVARILKDIG VSDVPLKVRK LVVKICDVVT
401: RRAGRLAAAG IAGILKKIGR DGSGGITSGR SRSEIQMQKR TVVAVEGGLY MNYTMFREYM EEALVEILGE EVSQYVVVKA MEDGSSIGSA LLVASLQS

Arabidopsis Description

HKL1Hexokinase-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS1]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.