Factsheet for Os01t0940100-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plastid 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
YLoc:	cytosol

mitochondrion: 19010998
mitochondrion: 23027867

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0596900-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G50460.1	Os03t0596900-01	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G105380.4	Barley	cytosol	85.43	63.54
Zm00001d042146_P002	Maize	mitochondrion, plastid	87.68	62.98
Zm00001d011889_P001	Maize	mitochondrion	86.27	61.97
TraesCS3A01G480900.1	Wheat	plastid	84.87	59.76
TraesCS3D01G475600.1	Wheat	plastid	84.31	59.49
TraesCS3B01G525400.2	Wheat	plastid	84.31	59.49
GSMUA_AchrUn_...	Banana	cytosol	67.79	59.17
CDY34475	Canola	cytosol	25.77	57.5
CDY20557	Canola	extracellular, vacuole	19.89	54.62
OQU88184	Sorghum	mitochondrion, plastid	88.24	53.57
CDY37134	Canola	endoplasmic reticulum, extracellular	62.47	52.59
CDY29586	Canola	cytosol	59.94	52.58
GSMUA_Achr1P11390_001	Banana	plastid	73.39	51.98
CDY68234	Canola	endoplasmic reticulum, extracellular, mitochondrion	60.22	51.56
Os05t0532600-01	Rice	cytosol	19.05	50.37
KRH77671	Soybean	plastid	69.75	50.0
GSMUA_Achr8P29510_001	Banana	endoplasmic reticulum, mitochondrion	71.43	49.61
KRH27814	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	68.91	49.4
KRH29072	Soybean	plastid	69.47	49.21
KRH24099	Soybean	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	69.47	49.21
Os05t0375100-00	Rice	mitochondrion	68.91	48.81
GSMUA_Achr11P...	Banana	endoplasmic reticulum	67.79	48.69
Os07t0197100-01	Rice	cytosol	29.69	48.62
Solyc11g065220.1.1	Tomato	endoplasmic reticulum	67.79	47.36
PGSC0003DMT400034299	Potato	endoplasmic reticulum	67.79	47.27
VIT_06s0061g00040.t01	Wine grape	plastid	69.19	47.23
CDY22797	Canola	plastid	62.18	44.58
AT1G50460.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	61.62	44.18
Bra018850.1-P	Field mustard	plastid	61.34	43.98
Bra035821.1-P	Field mustard	plastid	61.9	43.76
CDY24565	Canola	plastid	61.62	43.56
CDY25373	Canola	plastid	61.62	43.56
Bra014254.1-P	Field mustard	plastid	60.78	43.49
Bra030490.1-P	Field mustard	plastid	60.5	43.37
CDY07303	Canola	plastid	60.22	43.17
CDY45062	Canola	plastid	58.82	43.03
CDY03607	Canola	plastid	58.54	42.83
AT3G20040.1	Thale cress	plastid	59.94	42.63
CDX81950	Canola	mitochondrion	10.64	40.43
Os05t0187100-02	Rice	cytosol	51.54	39.74
Os01t0190400-01	Rice	cytosol	49.86	38.86
Os01t0742500-01	Rice	mitochondrion	50.98	35.97
Os07t0446800-00	Rice	plastid	49.3	35.34
Os05t0522500-01	Rice	mitochondrion	48.18	33.92
Os01t0722700-01	Rice	plastid	20.73	25.17
CDY37135	Canola	plastid	0.0	0.0
Os01t0722800-00	Rice	cytosol, plasma membrane	0.0	0.0

Protein Annotations

KEGG:00010+2.7.1.1	KEGG:00051+2.7.1.1	KEGG:00052+2.7.1.1	KEGG:00500+2.7.1.1	KEGG:00520+2.7.1.1	KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1	MapMan:3.1.4.3	Gene3D:3.30.420.40	Gene3D:3.40.367.20	ProteinID:BAF07268.1	ProteinID:BAS76148.1
GO:GO:0000166	GO:GO:0001678	GO:GO:0003674	GO:GO:0003824	GO:GO:0004340	GO:GO:0004396
GO:GO:0005488	GO:GO:0005524	GO:GO:0005536	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0005829	GO:GO:0005975	GO:GO:0006091
GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0008865	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0016773	GO:GO:0019158	GO:GO:0019725	GO:GO:0030246	GO:GO:0046835
GO:GO:0051156	InterPro:Hexokinase	InterPro:Hexokinase_BS	InterPro:Hexokinase_C	InterPro:Hexokinase_N	InterPro:IPR001312
EnsemblPlantsGene:Os01g0940100	EnsemblPlants:Os01t0940100-01	PFAM:PF00349	PFAM:PF03727	PRINTS:PR00475	ScanProsite:PS00378
PFscan:PS51748	PANTHER:PTHR19443	PANTHER:PTHR19443:SF6	UniProt:Q0JG60	SUPFAM:SSF53067	UniParc:UPI0000DD8EB0
SEG:seg	:	:	:	:	:

Description

HEXOKINASE-3Similar to Hexokinase. (Os01t0940100-01);Similar to Hexokinase-3. (Os01t0940100-02)

Coordinates

chr1:-:41305718..41311135

Molecular Weight (calculated)

38758.3 Da

IEP (calculated)

5.712

GRAVY (calculated)

-0.079

Length

357 amino acids

Sequence
(BLAST)

001: NFVALALKNF LEGEDDQDGK MALGFTFSFP VRQISVSSGS LIRWTKGFSI RDTVGRDVAQ CLNEALANCG LNVRVTALVN DTVGTLALGH YYDEDTVAAV
101: IIGSGTNACY IERTDAIIKC QGLLTNSGGM VVNMEWGNFW SSHLPRTPYD ILLDDETHNR NDQGFEKMIS GMYLGEIARL VFHRMAQESD VFGDAADSLS
201: NPFILSTPFL AAIREDDSPD LSEVRRILRE HLKIPDAPLK TRRLVVKVCD IVTRRAARLA AAGIVGILKK LGRDGSGAAS SGRGRGQPRR TVVAIEGGLY
301: QGYPVFREYL DEALVEILGE EVARNVTLRV TEDGSGVGAA LLAAVHSSNR QQQGGPI

Best Arabidopsis Sequence Match ( AT1G50460.1 )
(BLAST)

001: MGKVAVAFAA VAVVAACSVA AVMVGRRMKS RRKWRTVVEI LKELEDDCDT PVGRLRQVVD AMAVEMHAGL ASEGGSKLKM LLTFVDDLPT GREKGTYYAL
101: HLGGTYFRIL RVLLGDQRSY LDVQDVERHP IPSHLMNSTS EVLFNFLAFS LERFIEKEEN GSDSQGVRRE LAFTFSFPVK HTSISSGVLI KWTKGFEISE
201: MVGQDIAECL QGALNRRGLD MHVAALVNDT VGALSLGYYH DPDTVVAVVF GTGSNACYLE RTDAIIKCQG LLTTSGSMVV NMEWGNFWSS HLPRTSYDID
301: LDAESSNAND MGFEKMISGM YLGDIVRRVI LRMSEDSDIF GPISPVLSEP YVLRTNSVSA IHEDDTPELQ EVARILKDIG VSDVPLKVRK LVVKICDVVT
401: RRAGRLAAAG IAGILKKIGR DGSGGITSGR SRSEIQMQKR TVVAVEGGLY MNYTMFREYM EEALVEILGE EVSQYVVVKA MEDGSSIGSA LLVASLQS

Arabidopsis Description

HKL1Hexokinase-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS1]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.