Factsheet for VIT_06s0061g00040.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	mitochondrion
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_19s0015g00430.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G50460.1	VIT_19s0015g00430.t01	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77671	Soybean	plastid	74.76	78.51
KRH27814	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	74.38	78.11
KRH24099	Soybean	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	75.14	77.98
KRH29072	Soybean	plastid	74.57	77.38
PGSC0003DMT400034299	Potato	endoplasmic reticulum	73.04	74.61
Solyc11g065220.1.1	Tomato	endoplasmic reticulum	72.47	74.17
GSMUA_Achr1P11390_001	Banana	plastid	68.64	71.23
CDY22797	Canola	plastid	67.3	70.68
GSMUA_Achr8P29510_001	Banana	endoplasmic reticulum, mitochondrion	69.22	70.43
AT1G50460.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	66.92	70.28
Bra018850.1-P	Field mustard	plastid	66.92	70.28
CDY37134	Canola	endoplasmic reticulum, extracellular	56.6	69.81
CDY29586	Canola	cytosol	54.11	69.53
Bra030490.1-P	Field mustard	plastid	66.16	69.48
CDY68234	Canola	endoplasmic reticulum, extracellular, mitochondrion	55.26	69.3
CDY07303	Canola	plastid	65.97	69.28
Os01t0940100-01	Rice	mitochondrion	47.23	69.19
Bra014254.1-P	Field mustard	plastid	65.97	69.14
CDY03607	Canola	plastid	64.24	68.85
CDY45062	Canola	plastid	64.05	68.65
GSMUA_Achr11P...	Banana	endoplasmic reticulum	65.01	68.41
GSMUA_AchrUn_...	Banana	cytosol	53.15	67.97
CDY37135	Canola	plastid	12.05	67.74
AT3G20040.1	Thale cress	plastid	64.82	67.53
Zm00001d042146_P002	Maize	mitochondrion, plastid	64.05	67.4
Bra035821.1-P	Field mustard	plastid	65.01	67.33
Zm00001d011889_P001	Maize	mitochondrion	63.48	66.8
CDY25373	Canola	plastid	64.44	66.73
CDY24565	Canola	plastid	64.44	66.73
CDY20557	Canola	extracellular, vacuole	16.44	66.15
TraesCS3A01G480900.1	Wheat	plastid	63.86	65.88
TraesCS3B01G525400.2	Wheat	plastid	63.29	65.42
TraesCS3D01G475600.1	Wheat	plastid	62.33	64.43
HORVU3Hr1G105380.4	Barley	cytosol	58.13	63.33
Os05t0375100-00	Rice	mitochondrion	55.45	57.54
OQU88184	Sorghum	mitochondrion, plastid	64.63	57.48
VIT_11s0016g03070.t01	Wine grape	plastid	54.49	57.34
OQU77891	Sorghum	plastid	54.88	57.29
HORVU1Hr1G057760.1	Barley	plastid	53.92	56.4
TraesCS1D01G237400.1	Wheat	plastid	53.73	56.2
TraesCS1A01G234700.1	Wheat	mitochondrion, plastid	52.96	55.96
Zm00001d037861_P001	Maize	plastid	53.73	55.86
TraesCS1B01G248900.1	Wheat	mitochondrion, plastid	52.77	55.2
VIT_09s0002g03390.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	51.24	53.82
VIT_18s0001g14230.t01	Wine grape	plastid	47.42	51.13
VIT_00s2422g00010.t01	Wine grape	cytosol	15.11	44.38
VIT_00s0824g00010.t01	Wine grape	plastid	38.05	40.37

Protein Annotations

KEGG:00010+2.7.1.1	KEGG:00051+2.7.1.1	KEGG:00052+2.7.1.1	KEGG:00500+2.7.1.1	KEGG:00520+2.7.1.1	KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1	EntrezGene:100263580	wikigene:100263580	MapMan:3.1.4.3	Gene3D:3.30.420.40	Gene3D:3.40.367.20
ProteinID:CBI17194	ProteinID:CBI17194.3	UniProt:D7SNG5	EMBL:FN594957	GO:GO:0000166	GO:GO:0001678
GO:GO:0003674	GO:GO:0003824	GO:GO:0004340	GO:GO:0004396	GO:GO:0005488	GO:GO:0005524
GO:GO:0005536	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0008865	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0016773	GO:GO:0019158	GO:GO:0019725	GO:GO:0030246	GO:GO:0046835
GO:GO:0051156	InterPro:Hexokinase	InterPro:Hexokinase_BS	InterPro:Hexokinase_C	InterPro:Hexokinase_N	InterPro:IPR001312
EntrezGene:LOC100263580	wikigene:LOC100263580	PFAM:PF00349	PFAM:PF03727	PRINTS:PR00475	ScanProsite:PS00378
PFscan:PS51748	PANTHER:PTHR19443	PANTHER:PTHR19443:SF6	SUPFAM:SSF53067	TMHMM:TMhelix	UniParc:UPI00015CA0EB
ArrayExpress:VIT_06s0061g00040	EnsemblPlantsGene:VIT_06s0061g00040	EnsemblPlants:VIT_06s0061g00040.t01	RefSeq:XP_002274759	RefSeq:XP_002274759.1	RefSeq:XP_019076346.1
RefSeq:XP_019076347.1	SEG:seg	:	:	:	:

Description

Phosphotransferase [Source:UniProtKB/TrEMBL;Acc:D7SNG5]

Coordinates

chr6:+:17247107..17256029

Molecular Weight (calculated)

56693.4 Da

IEP (calculated)

8.144

GRAVY (calculated)

-0.057

Length

523 amino acids

Sequence
(BLAST)

001: MGKVGFGLAV SCAAATCAIA AILVGKRVRS RRKWRRVVGV LRDLEEACET SVGRLRQVVD AMAVEMHAGL ASEGGSKLKM LLTFVDKLPN GSERGKYYAL
101: DLGGTNFRVL QIQLGGKTSS ILSCDVERQP IPQDLMTSTS EDLFDFIASS LKQFVEREAQ NSEFSPVKRR ELGFTFSFPV KQTSVSSGIL IKWTKRFSVK
201: DMVGKDVSEC LQHAMTRNGL DMRVAVLVND TVGTLALGHY NDPDTVAAVI IGTGTNACYL ERTDAIIKCQ GLLTTSGGMV VNMEWGNFWS SHLPRTSYDI
301: DLDGDSPNPN DQGFEKMISG MYLGDIVRRV ILRMSQESDI FGPVSSRLSM PFILSTPSMA DMHADESPEL MEVARILKED LQIPDVPLKV RKLVVKVCDV
401: VTRRAARLAA AGIVGILKKI GRDGSGGVAS GRSRGSDGKM RRTVVAMDGS LYTRYTMFKE YLHEALCEIL GEEVAQYVIL KVTEDGSGIG AALLAASHSS
501: HSSSSSSSSS SSSSSVVDSQ RLP

Best Arabidopsis Sequence Match ( AT1G50460.1 )
(BLAST)

001: MGKVAVAFAA VAVVAACSVA AVMVGRRMKS RRKWRTVVEI LKELEDDCDT PVGRLRQVVD AMAVEMHAGL ASEGGSKLKM LLTFVDDLPT GREKGTYYAL
101: HLGGTYFRIL RVLLGDQRSY LDVQDVERHP IPSHLMNSTS EVLFNFLAFS LERFIEKEEN GSDSQGVRRE LAFTFSFPVK HTSISSGVLI KWTKGFEISE
201: MVGQDIAECL QGALNRRGLD MHVAALVNDT VGALSLGYYH DPDTVVAVVF GTGSNACYLE RTDAIIKCQG LLTTSGSMVV NMEWGNFWSS HLPRTSYDID
301: LDAESSNAND MGFEKMISGM YLGDIVRRVI LRMSEDSDIF GPISPVLSEP YVLRTNSVSA IHEDDTPELQ EVARILKDIG VSDVPLKVRK LVVKICDVVT
401: RRAGRLAAAG IAGILKKIGR DGSGGITSGR SRSEIQMQKR TVVAVEGGLY MNYTMFREYM EEALVEILGE EVSQYVVVKA MEDGSSIGSA LLVASLQS

Arabidopsis Description

HKL1Hexokinase-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS1]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.