Factsheet for TraesCS1A01G234700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

plastid 2
endoplasmic reticulum 3
plasma membrane 3
vacuole 3
golgi 3
extracellular 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G137900.1
TraesCS4B01G148100.1
TraesCS4D01G153300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G50460.1	TraesCS4A01G137900.1	AT4G26630.1	25387881
AT1G50460.1	TraesCS4B01G148100.1	AT4G26630.1	25387881
AT1G50460.1	TraesCS4D01G153300.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G237400.1	Wheat	plastid	95.96	95.0
TraesCS1B01G248900.1	Wheat	mitochondrion, plastid	94.95	94.0
HORVU1Hr1G057760.1	Barley	plastid	91.52	90.6
OQU77891	Sorghum	plastid	76.16	75.25
Os05t0375100-00	Rice	mitochondrion	75.96	74.6
Zm00001d037861_P001	Maize	plastid	73.33	72.17
TraesCS3A01G480900.1	Wheat	plastid	63.23	61.74
GSMUA_AchrUn_...	Banana	cytosol	48.89	59.17
GSMUA_Achr1P11390_001	Banana	plastid	60.2	59.13
PGSC0003DMT400034299	Potato	endoplasmic reticulum	58.18	56.25
KRH77671	Soybean	plastid	56.57	56.22
GSMUA_Achr8P29510_001	Banana	endoplasmic reticulum, mitochondrion	57.98	55.84
GSMUA_Achr11P...	Banana	endoplasmic reticulum	55.96	55.73
KRH27814	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	55.96	55.62
Solyc11g065220.1.1	Tomato	endoplasmic reticulum	57.37	55.58
KRH29072	Soybean	plastid	55.76	54.76
KRH24099	Soybean	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	55.35	54.37
VIT_06s0061g00040.t01	Wine grape	plastid	55.96	52.96
CDY29586	Canola	cytosol	41.41	50.37
CDY37134	Canola	endoplasmic reticulum, extracellular	43.03	50.24
CDY22797	Canola	plastid	50.51	50.2
CDY68234	Canola	endoplasmic reticulum, extracellular, mitochondrion	42.22	50.12
Bra035821.1-P	Field mustard	plastid	50.91	49.9
CDY25373	Canola	plastid	50.71	49.7
AT1G50460.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	49.9	49.6
Bra018850.1-P	Field mustard	plastid	49.9	49.6
CDY24565	Canola	plastid	50.51	49.51
Bra030490.1-P	Field mustard	plastid	49.29	49.0
CDY07303	Canola	plastid	49.29	49.0
AT3G20040.1	Thale cress	plastid	49.49	48.8
CDY34475	Canola	cytosol	15.76	48.75
Bra014254.1-P	Field mustard	plastid	48.89	48.5
CDY03607	Canola	plastid	47.68	48.36
CDY45062	Canola	plastid	47.68	48.36
TraesCS1A01G355200.1	Wheat	golgi	47.27	47.46
TraesCS3A01G108500.2	Wheat	cytosol	43.64	46.96
TraesCS1A01G122800.1	Wheat	cytosol	42.83	45.79
TraesCS3A01G286200.1	Wheat	mitochondrion, plastid	45.66	45.66
CDY20557	Canola	extracellular, vacuole	11.72	44.62
TraesCS1A01G342500.1	Wheat	plastid	44.24	43.2
TraesCS2A01G005200.1	Wheat	mitochondrion	43.03	42.69
CDY37135	Canola	plastid	7.88	41.94
TraesCS3A01G276100.1	Wheat	plastid	42.42	41.42
CDX81950	Canola	mitochondrion	6.46	34.04
TraesCS7A01G479500.1	Wheat	cytosol, endoplasmic reticulum	6.67	32.35

Protein Annotations

KEGG:00010+2.7.1.1	KEGG:00051+2.7.1.1	KEGG:00052+2.7.1.1	KEGG:00500+2.7.1.1	KEGG:00520+2.7.1.1	KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1	MapMan:3.1.4.3	Gene3D:3.30.420.40	Gene3D:3.40.367.20	GO:GO:0000166	GO:GO:0001678
GO:GO:0003674	GO:GO:0003824	GO:GO:0004396	GO:GO:0005488	GO:GO:0005524	GO:GO:0005536
GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0016773
GO:GO:0019725	GO:GO:0030246	InterPro:Hexokinase	InterPro:Hexokinase_BS	InterPro:Hexokinase_C	InterPro:Hexokinase_N
InterPro:IPR001312	PFAM:PF00349	PFAM:PF03727	PRINTS:PR00475	ScanProsite:PS00378	PFscan:PS51748
PANTHER:PTHR19443	PANTHER:PTHR19443:SF19	SUPFAM:SSF53067	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1A01G234700	EnsemblPlants:TraesCS1A01G234700.1
TIGR:cd00012	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1A:+:412222937..412225984

Molecular Weight (calculated)

54069.2 Da

IEP (calculated)

4.841

GRAVY (calculated)

0.098

Length

495 amino acids

Sequence
(BLAST)

001: MGGAGWLRVA AAVTCALATA MVVQRVVAWR RWLPAMAVQR DVEESFATPT ERLQRVVNSL AVEMFAGLAS EDASKVRMLL TCVDSLPDVS EEGIYYAVDI
101: GGTGFRFLKV QLGAGSTIIN QKIERQPVKK ELMKGTSEDF FNSIASTLKN FIEREGDEGR ALGFTFSFPV RQFSITSGSL IRWTKEFSIE EAIGQDVAQC
201: LNEALERNGL NLKVNALMNN TVGTLALGHY YDEDTIAAVI IGAGTNACYI ERNEAITKCQ CLLTNSGQTV VNVEWGSFCP PQIPLTPYDI CFHNETPNYY
301: DQGFEKMISG MYLGEIARLV FHKMAQESDV FGTDVDGLAI PFILSTPCLA AICEDDSLDL KEVGSILEEH LKIHNVPLKT RRLVQRVCDI ITQRAARLAA
401: AGIVAILQKL GRDGTLCGTT RVRSMTGVPK RSVIAIEGGL YQEYSVFREY LNEAVLEILG EEIAATVVLK VVEEGSGLGA ALIAAAYSST RNNSI

Best Arabidopsis Sequence Match ( AT1G50460.1 )
(BLAST)

001: MGKVAVAFAA VAVVAACSVA AVMVGRRMKS RRKWRTVVEI LKELEDDCDT PVGRLRQVVD AMAVEMHAGL ASEGGSKLKM LLTFVDDLPT GREKGTYYAL
101: HLGGTYFRIL RVLLGDQRSY LDVQDVERHP IPSHLMNSTS EVLFNFLAFS LERFIEKEEN GSDSQGVRRE LAFTFSFPVK HTSISSGVLI KWTKGFEISE
201: MVGQDIAECL QGALNRRGLD MHVAALVNDT VGALSLGYYH DPDTVVAVVF GTGSNACYLE RTDAIIKCQG LLTTSGSMVV NMEWGNFWSS HLPRTSYDID
301: LDAESSNAND MGFEKMISGM YLGDIVRRVI LRMSEDSDIF GPISPVLSEP YVLRTNSVSA IHEDDTPELQ EVARILKDIG VSDVPLKVRK LVVKICDVVT
401: RRAGRLAAAG IAGILKKIGR DGSGGITSGR SRSEIQMQKR TVVAVEGGLY MNYTMFREYM EEALVEILGE EVSQYVVVKA MEDGSSIGSA LLVASLQS

Arabidopsis Description

HKL1Hexokinase-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS1]
SUBAcon: [endoplasmic reticulum,plasma membrane,vacuole,golgi,plastid,cytosol,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.