Factsheet for TraesCS1A01G342500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

plastid: 16595579
plastid: 18419817
golgi: 23128297
golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms PMID: 18419817 doi

FM Dupont

Western Regional Research Center, United States Department of Agriculture, Agricultural Research Service, 800 Buchanan Street, Albany, CA 94710K, USA.

msms PMID: 16595579 doi

Y Balmer, WH Vensel, FM DuPont, BB Buchanan, WJ Hurkman

Department of Plant and Microbial Biology, University of California, 111 Koshland Hall, Berkeley, CA 94720, USA.

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G344600.1	Wheat	plastid	98.22	98.22
TraesCS1B01G355600.1	Wheat	golgi	97.63	97.63
EES18534	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	88.36	88.36
Zm00001d038792_P001	Maize	plasma membrane	87.97	87.97
Os05t0522500-01	Rice	mitochondrion	86.39	86.39
Zm00001d010796_P001	Maize	plasma membrane	86.19	85.85
HORVU1Hr1G075680.2	Barley	plastid	74.95	82.97
TraesCS3A01G276100.1	Wheat	plastid	78.9	78.9
GSMUA_Achr3P16320_001	Banana	plastid	67.85	68.8
GSMUA_Achr3P31700_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	66.27	68.15
GSMUA_Achr6P26380_001	Banana	plastid	67.06	68.0
TraesCS1A01G355200.1	Wheat	golgi	65.68	67.55
TraesCS3A01G108500.2	Wheat	cytosol	57.2	63.04
TraesCS1A01G122800.1	Wheat	cytosol	57.2	62.63
TraesCS3A01G286200.1	Wheat	mitochondrion, plastid	59.57	61.01
GSMUA_Achr8P27620_001	Banana	plastid	63.71	54.65
TraesCS2A01G005200.1	Wheat	mitochondrion	50.89	51.7
TraesCS7A01G479500.1	Wheat	cytosol, endoplasmic reticulum	9.86	49.02
TraesCS3A01G480900.1	Wheat	plastid	46.15	46.15
TraesCS1A01G234700.1	Wheat	mitochondrion, plastid	43.2	44.24

Protein Annotations

KEGG:00010+2.7.1.1	KEGG:00051+2.7.1.1	KEGG:00052+2.7.1.1	KEGG:00500+2.7.1.1	KEGG:00520+2.7.1.1	KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1	MapMan:3.1.4.3	Gene3D:3.30.420.40	Gene3D:3.40.367.20	GO:GO:0000166	GO:GO:0001678
GO:GO:0003674	GO:GO:0003824	GO:GO:0004340	GO:GO:0004396	GO:GO:0005488	GO:GO:0005524
GO:GO:0005536	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009058	GO:GO:0009749	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0016773	GO:GO:0019725	GO:GO:0030246	InterPro:Hexokinase	InterPro:Hexokinase_BS	InterPro:Hexokinase_C
InterPro:Hexokinase_N	InterPro:IPR001312	PFAM:PF00349	PFAM:PF03727	PRINTS:PR00475	ScanProsite:PS00378
PFscan:PS51748	PANTHER:PTHR19443	PANTHER:PTHR19443:SF15	SUPFAM:SSF53067	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1A01G342500
EnsemblPlants:TraesCS1A01G342500.1	TIGR:cd00012	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1A:+:531603663..531607753

Molecular Weight (calculated)

54795.3 Da

IEP (calculated)

6.522

GRAVY (calculated)

0.031

Length

507 amino acids

Sequence
(BLAST)

001: MGKAAAVGTA VVVCAAVGTA MVLGRRRRRR DAELLGAAEA ERKRRVAAVI EDVERTLATP TALLRGISDA LVLEMERGLR GDIHSQLKML ISYVDQLPTG
101: DEHGLFYALD LGGTNFRVLR VQLGGREKRV AKQQYQEVSI PPHLMVGTSL ELFDFIASVL AKFIETEGDE FHLPVGRQRE LGFTFSFPVN QLSISSGTLI
201: KWTKGFSING AVGEDVVAEL SKAMERQGLD MKVSALVNDT VGTLAGGRYM DNDVVAAIIL GTGTNAAYVE HANAIPKWTG LLPKSGNMVI NTEWGSFKSD
301: KLPLSEYDKA LDFESLNPGE QIYEKLISGM YLGEIVRRIL LKLAHDAALF GDVVPAKLEL PFVLRTPDMS AMHHDASHDL KILGSKLKDI VGVADTSLEV
401: RYITRHICDI VAERGARLAA AGIYGILKKL GRDKVPTDGS PMPRTVVALD GGLYEHYKKF SSCLEATLSD LLGDEASSSL VAKLANDGSG IGAALLAASH
501: SQYADIY

Best Arabidopsis Sequence Match ( AT1G47840.1 )
(BLAST)

001: MSLMFSSPVV TPALGSFTFS SRPRSNYIVM SAVRSNSAST CPILTKFQKD CATPTPYLRN VANAIADDMR DGLAVEGGGD LEMILTFVDA LPSGNEEGLF
101: YALDLGGTNF RVRSVQLGGK KERVLATESE QISISQKLMI GTSEELFGFI ASKLANFVAK EKPGRFLLEE GRKRELGFTF SFPVKQTSID SGTLSKWTKG
201: FKVSGMEGKN VVACLNEAME AHGLDMRVSA LVNDGVGTLA GARYWDEDVM VGVILGTGTN ACYVEQKHAI PKLRSKSSSG TTIINTEWGG FSKILPQTIF
301: DLEMDETSLN PGEHLYEKMI SGMYLGEIVR RVLLHMCETS DLFGHFAPAK LSTPLALRTE HLCKMQEDNT DDLRDVGSIL YDFLDVEANM NARRRVVEVC
401: DTVVKRGGRL AGAGIVAILE KIEKDTKRMG SGKRTVVAMD GALYEKYPQY RQYMQDALVE LLGHKLASHV AIKHTKDVSG LGAALLAATN SIY

Arabidopsis Description

HXK3Hexokinase-like 1 protein [Source:UniProtKB/Swiss-Prot;Acc:Q9FZG4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.