Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 5
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
19938377
nucleus: 19938377 |
mitochondrion:
19010998
plastid: 21433289 mitochondrion: 23027867 plasma membrane: 27800704 plasma membrane: 28056797 |
gfp PMID:
19938377
doi
Plant Metabolism Research Center & Graduate School of Biotechnology, Kyung Hee University, Yongin, Korea.
msms PMID:
23027867
doi
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
Os06t0568200-01 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT4G29130.1 | Os06t0568200-01 | AT1G76030.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1D01G344600.1 | Wheat | plastid | 87.18 | 87.18 |
TraesCS1A01G342500.1 | Wheat | plastid | 86.39 | 86.39 |
TraesCS1B01G355600.1 | Wheat | golgi | 86.19 | 86.19 |
EES18534 | Sorghum | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 86.0 | 86.0 |
Zm00001d038792_P001 | Maize | plasma membrane | 85.21 | 85.21 |
Zm00001d010796_P001 | Maize | plasma membrane | 84.02 | 83.69 |
Os01t0742500-01 | Rice | mitochondrion | 80.47 | 80.63 |
HORVU1Hr1G075680.2 | Barley | plastid | 67.46 | 74.67 |
GSMUA_Achr3P31700_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 65.68 | 67.55 |
GSMUA_Achr3P16320_001 | Banana | plastid | 66.47 | 67.4 |
VIT_11s0016g03070.t01 | Wine grape | plastid | 65.68 | 67.0 |
Os05t0532600-01 | Rice | cytosol | 17.75 | 66.67 |
AT4G29130.1 | Thale cress | plastid | 65.09 | 66.53 |
GSMUA_Achr6P26380_001 | Banana | plastid | 64.89 | 65.8 |
Bra039025.1-P | Field mustard | cytosol | 64.3 | 65.2 |
CDY35895 | Canola | plastid | 64.1 | 65.0 |
CDX82746 | Canola | cytosol | 63.51 | 64.53 |
CDY03331 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 63.31 | 64.33 |
Solyc12g008510.1.1 | Tomato | plastid | 63.12 | 64.13 |
CDY48733 | Canola | plastid | 63.12 | 64.13 |
KRH60208 | Soybean | endoplasmic reticulum | 62.92 | 64.06 |
PGSC0003DMT400000795 | Potato | endoplasmic reticulum | 62.92 | 63.93 |
Bra036699.1-P | Field mustard | plastid | 62.92 | 63.93 |
KRH41490 | Soybean | endoplasmic reticulum | 62.72 | 63.86 |
KRH74246 | Soybean | plastid | 62.33 | 63.71 |
KRH48988 | Soybean | nucleus | 61.93 | 63.05 |
Os05t0187100-02 | Rice | cytosol | 57.4 | 62.85 |
AT2G19860.1 | Thale cress | cytosol | 61.93 | 62.55 |
VIT_09s0002g03390.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 61.34 | 62.45 |
Os01t0190400-01 | Rice | cytosol | 56.21 | 62.23 |
Solyc03g121070.2.1 | Tomato | plastid | 60.55 | 61.65 |
PGSC0003DMT400006474 | Potato | mitochondrion | 60.16 | 61.37 |
KRH44270 | Soybean | endoplasmic reticulum | 58.58 | 60.37 |
KRH74248 | Soybean | nucleus | 58.97 | 60.28 |
Solyc06g066440.2.1 | Tomato | plastid | 58.78 | 60.08 |
PGSC0003DMT400042598 | Potato | plastid | 58.58 | 59.88 |
Os01t0722700-01 | Rice | plastid | 33.14 | 57.14 |
Os07t0446800-00 | Rice | plastid | 54.64 | 55.62 |
GSMUA_Achr8P27620_001 | Banana | plastid | 62.33 | 53.47 |
KRH47202 | Soybean | cytosol | 41.22 | 51.6 |
Os07t0197100-01 | Rice | cytosol | 21.89 | 50.92 |
Os01t0940100-01 | Rice | mitochondrion | 33.92 | 48.18 |
Bra031105.1-P | Field mustard | cytosol | 12.43 | 47.73 |
Os05t0375100-00 | Rice | mitochondrion | 43.98 | 44.25 |
Os01t0722800-00 | Rice | cytosol, plasma membrane | 0.0 | 0.0 |
Protein Annotations
Description
HEXOKINASE-5Similar to Hexokinase 1 (EC 2.7.1.1). (Os05t0522500-01)
Coordinates
chr5:+:26017332..26022265
Molecular Weight (calculated)
54661.8 Da
IEP (calculated)
6.001
GRAVY (calculated)
-0.022
Length
507 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKAAAVGTA VVVAAAVGVA VVLARRRRRR DLELVEGAAA ERKRKVAAVI EDVEHALSTP TALLRGISDA MVTEMERGLR GDSHAMVKML ITYVDNLPTG
101: NEQGLFYALD LGGTNFRVLR VQLGGKEKRV VQQQYEEVSI PPHLMVGTSM ELFDFIASAL SKFVDTEGDD FHLPEGRQRE LGFTFSFPVS QTSISSGTLI
201: KWTKGFSIND AVGEDVVSEL GKAMERQGLD MKIAALVNDT VGTLAGGRYA DNSVVAAIIL GTGTNAAYVE NANAIPKWTG LLPRSGNMVI NTEWGSFKSD
301: KLPLSEFDKA MDFESLNPGE QIYEKLISGM YLGEIVRRIL LKLAHDAALF GDVVPSKLEQ PFVLRTPDMS AMHHDSSHDL KTVGAKLKDI VGVPDTSLEV
401: RYITSHICDI VAERAARLAA AGIYGVLKKL GRDKMPKDGS KMPRTVIALD GGLYEHYKKF SSCLESTLTD LLGDDVSSSV VTKLANDGSG IGAALLAASH
501: SQYAEID
101: NEQGLFYALD LGGTNFRVLR VQLGGKEKRV VQQQYEEVSI PPHLMVGTSM ELFDFIASAL SKFVDTEGDD FHLPEGRQRE LGFTFSFPVS QTSISSGTLI
201: KWTKGFSIND AVGEDVVSEL GKAMERQGLD MKIAALVNDT VGTLAGGRYA DNSVVAAIIL GTGTNAAYVE NANAIPKWTG LLPRSGNMVI NTEWGSFKSD
301: KLPLSEFDKA MDFESLNPGE QIYEKLISGM YLGEIVRRIL LKLAHDAALF GDVVPSKLEQ PFVLRTPDMS AMHHDSSHDL KTVGAKLKDI VGVPDTSLEV
401: RYITSHICDI VAERAARLAA AGIYGVLKKL GRDKMPKDGS KMPRTVIALD GGLYEHYKKF SSCLESTLTD LLGDDVSSSV VTKLANDGSG IGAALLAASH
501: SQYAEID
001: MGKVAVGATV VCTAAVCAVA VLVVRRRMQS SGKWGRVLAI LKAFEEDCAT PISKLRQVAD AMTVEMHAGL ASDGGSKLKM LISYVDNLPS GDEKGLFYAL
101: DLGGTNFRVM RVLLGGKQER VVKQEFEEVS IPPHLMTGGS DELFNFIAEA LAKFVATECE DFHLPEGRQR ELGFTFSFPV KQTSLSSGSL IKWTKGFSIE
201: EAVGQDVVGA LNKALERVGL DMRIAALVND TVGTLAGGRY YNPDVVAAVI LGTGTNAAYV ERATAIPKWH GLLPKSGEMV INMEWGNFRS SHLPLTEFDH
301: TLDFESLNPG EQILEKIISG MYLGEILRRV LLKMAEDAAF FGDTVPSKLR IPFIIRTPHM SAMHNDTSPD LKIVGSKIKD ILEVPTTSLK MRKVVISLCN
401: IIATRGARLS AAGIYGILKK LGRDTTKDEE VQKSVIAMDG GLFEHYTQFS ECMESSLKEL LGDEASGSVE VTHSNDGSGI GAALLAASHS LYLEDS
101: DLGGTNFRVM RVLLGGKQER VVKQEFEEVS IPPHLMTGGS DELFNFIAEA LAKFVATECE DFHLPEGRQR ELGFTFSFPV KQTSLSSGSL IKWTKGFSIE
201: EAVGQDVVGA LNKALERVGL DMRIAALVND TVGTLAGGRY YNPDVVAAVI LGTGTNAAYV ERATAIPKWH GLLPKSGEMV INMEWGNFRS SHLPLTEFDH
301: TLDFESLNPG EQILEKIISG MYLGEILRRV LLKMAEDAAF FGDTVPSKLR IPFIIRTPHM SAMHNDTSPD LKIVGSKIKD ILEVPTTSLK MRKVVISLCN
401: IIATRGARLS AAGIYGILKK LGRDTTKDEE VQKSVIAMDG GLFEHYTQFS ECMESSLKEL LGDEASGSVE VTHSNDGSGI GAALLAASHS LYLEDS
Arabidopsis Description
HXK1Phosphotransferase [Source:UniProtKB/TrEMBL;Acc:Q0WLE0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.