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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • cytosol 2
  • plastid 5
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:cytosol
EpiLoc:plastid
iPSORT:secretory
MultiLoc:plastid
Plant-mPloc:mitochondrion, plastid
Predotar:secretory
PProwler:secretory
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
mitochondrion: 19938377
nucleus: 19938377
mitochondrion: 19010998
plastid: 21433289
mitochondrion: 23027867
plasma membrane: 27800704
plasma membrane: 28056797
gfp PMID: 19938377 doi
JI Cho, N Ryoo, TR Hahn, JS Jeon
Plant Metabolism Research Center & Graduate School of Biotechnology, Kyung Hee University, Yongin, Korea.
msms PMID: 23027867 doi
G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
msms PMID: 19010998 doi
S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar
Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.
msms PMID: 21433289 doi
S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky
Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.
PPI

Inferred distinct locusB in Crop

locusBlocations
Os06t0568200-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G29130.1 Os06t0568200-01 AT1G76030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G344600.1 Wheat plastid 87.18 87.18
TraesCS1A01G342500.1 Wheat plastid 86.39 86.39
TraesCS1B01G355600.1 Wheat golgi 86.19 86.19
EES18534 Sorghum endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole 86.0 86.0
Zm00001d038792_P001 Maize plasma membrane 85.21 85.21
Zm00001d010796_P001 Maize plasma membrane 84.02 83.69
Os01t0742500-01 Rice mitochondrion 80.47 80.63
HORVU1Hr1G075680.2 Barley plastid 67.46 74.67
GSMUA_Achr3P31700_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 65.68 67.55
GSMUA_Achr3P16320_001 Banana plastid 66.47 67.4
VIT_11s0016g03070.t01 Wine grape plastid 65.68 67.0
Os05t0532600-01 Rice cytosol 17.75 66.67
AT4G29130.1 Thale cress plastid 65.09 66.53
GSMUA_Achr6P26380_001 Banana plastid 64.89 65.8
Bra039025.1-P Field mustard cytosol 64.3 65.2
CDY35895 Canola plastid 64.1 65.0
CDX82746 Canola cytosol 63.51 64.53
CDY03331 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 63.31 64.33
Solyc12g008510.1.1 Tomato plastid 63.12 64.13
CDY48733 Canola plastid 63.12 64.13
KRH60208 Soybean endoplasmic reticulum 62.92 64.06
PGSC0003DMT400000795 Potato endoplasmic reticulum 62.92 63.93
Bra036699.1-P Field mustard plastid 62.92 63.93
KRH41490 Soybean endoplasmic reticulum 62.72 63.86
KRH74246 Soybean plastid 62.33 63.71
KRH48988 Soybean nucleus 61.93 63.05
Os05t0187100-02 Rice cytosol 57.4 62.85
AT2G19860.1 Thale cress cytosol 61.93 62.55
VIT_09s0002g03390.t01 Wine grape cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 61.34 62.45
Os01t0190400-01 Rice cytosol 56.21 62.23
Solyc03g121070.2.1 Tomato plastid 60.55 61.65
PGSC0003DMT400006474 Potato mitochondrion 60.16 61.37
KRH44270 Soybean endoplasmic reticulum 58.58 60.37
KRH74248 Soybean nucleus 58.97 60.28
Solyc06g066440.2.1 Tomato plastid 58.78 60.08
PGSC0003DMT400042598 Potato plastid 58.58 59.88
Os01t0722700-01 Rice plastid 33.14 57.14
Os07t0446800-00 Rice plastid 54.64 55.62
GSMUA_Achr8P27620_001 Banana plastid 62.33 53.47
KRH47202 Soybean cytosol 41.22 51.6
Os07t0197100-01 Rice cytosol 21.89 50.92
Os01t0940100-01 Rice mitochondrion 33.92 48.18
Bra031105.1-P Field mustard cytosol 12.43 47.73
Os05t0375100-00 Rice mitochondrion 43.98 44.25
Os01t0722800-00 Rice cytosol, plasma membrane 0.0 0.0
Protein Annotations
KEGG:00010+2.7.1.1KEGG:00051+2.7.1.1KEGG:00052+2.7.1.1KEGG:00500+2.7.1.1KEGG:00520+2.7.1.1KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1MapMan:3.1.4.3Gene3D:3.30.420.40Gene3D:3.40.367.20EntrezGene:4339361ProteinID:AAV44032.1
ProteinID:AAV59322.1EMBL:AF372831ProteinID:BAF17996.1ProteinID:BAS94954.1EMBL:DQ116387ProteinID:EEE64409.1
GO:GO:0000166GO:GO:0001678GO:GO:0003674GO:GO:0003824GO:GO:0004340GO:GO:0004396
GO:GO:0005488GO:GO:0005524GO:GO:0005536GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005739GO:GO:0005829GO:GO:0005975GO:GO:0006091GO:GO:0006096
GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0008865GO:GO:0009056GO:GO:0009058
GO:GO:0009507GO:GO:0009527GO:GO:0009536GO:GO:0009707GO:GO:0009749GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0016773
GO:GO:0019158GO:GO:0019725GO:GO:0030246GO:GO:0046835GO:GO:0051156InterPro:Hexokinase
InterPro:Hexokinase_BSInterPro:Hexokinase_CInterPro:Hexokinase_NInterPro:IPR001312EnsemblPlantsGene:Os05g0522500EnsemblPlants:Os05t0522500-01
PFAM:PF00349PFAM:PF03727PRINTS:PR00475ScanProsite:PS00378PFscan:PS51748PANTHER:PTHR19443
PANTHER:PTHR19443:SF15UniProt:Q5W676SUPFAM:SSF53067TMHMM:TMhelixUniParc:UPI00000A0D71RefSeq:XP_015639323.1
SEG:seg:::::
Description
HEXOKINASE-5Similar to Hexokinase 1 (EC 2.7.1.1). (Os05t0522500-01)
Coordinates
chr5:+:26017332..26022265
Molecular Weight (calculated)
54661.8 Da
IEP (calculated)
6.001
GRAVY (calculated)
-0.022
Length
507 amino acids
Sequence
(BLAST)
001: MGKAAAVGTA VVVAAAVGVA VVLARRRRRR DLELVEGAAA ERKRKVAAVI EDVEHALSTP TALLRGISDA MVTEMERGLR GDSHAMVKML ITYVDNLPTG
101: NEQGLFYALD LGGTNFRVLR VQLGGKEKRV VQQQYEEVSI PPHLMVGTSM ELFDFIASAL SKFVDTEGDD FHLPEGRQRE LGFTFSFPVS QTSISSGTLI
201: KWTKGFSIND AVGEDVVSEL GKAMERQGLD MKIAALVNDT VGTLAGGRYA DNSVVAAIIL GTGTNAAYVE NANAIPKWTG LLPRSGNMVI NTEWGSFKSD
301: KLPLSEFDKA MDFESLNPGE QIYEKLISGM YLGEIVRRIL LKLAHDAALF GDVVPSKLEQ PFVLRTPDMS AMHHDSSHDL KTVGAKLKDI VGVPDTSLEV
401: RYITSHICDI VAERAARLAA AGIYGVLKKL GRDKMPKDGS KMPRTVIALD GGLYEHYKKF SSCLESTLTD LLGDDVSSSV VTKLANDGSG IGAALLAASH
501: SQYAEID
Best Arabidopsis Sequence Match ( AT4G29130.1 )
(BLAST)
001: MGKVAVGATV VCTAAVCAVA VLVVRRRMQS SGKWGRVLAI LKAFEEDCAT PISKLRQVAD AMTVEMHAGL ASDGGSKLKM LISYVDNLPS GDEKGLFYAL
101: DLGGTNFRVM RVLLGGKQER VVKQEFEEVS IPPHLMTGGS DELFNFIAEA LAKFVATECE DFHLPEGRQR ELGFTFSFPV KQTSLSSGSL IKWTKGFSIE
201: EAVGQDVVGA LNKALERVGL DMRIAALVND TVGTLAGGRY YNPDVVAAVI LGTGTNAAYV ERATAIPKWH GLLPKSGEMV INMEWGNFRS SHLPLTEFDH
301: TLDFESLNPG EQILEKIISG MYLGEILRRV LLKMAEDAAF FGDTVPSKLR IPFIIRTPHM SAMHNDTSPD LKIVGSKIKD ILEVPTTSLK MRKVVISLCN
401: IIATRGARLS AAGIYGILKK LGRDTTKDEE VQKSVIAMDG GLFEHYTQFS ECMESSLKEL LGDEASGSVE VTHSNDGSGI GAALLAASHS LYLEDS
Arabidopsis Description
HXK1Phosphotransferase [Source:UniProtKB/TrEMBL;Acc:Q0WLE0]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.