Factsheet for Os01t0722800-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os06t0568200-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G29130.1	Os06t0568200-01	AT1G76030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0722700-01	Rice	plastid	1.79	1.02
PGSC0003DMT400006474	Potato	mitochondrion	0.0	0.0
Os01t0742500-01	Rice	mitochondrion	0.0	0.0
Os01t0940100-01	Rice	mitochondrion	0.0	0.0
Os05t0187100-02	Rice	cytosol	0.0	0.0
Os05t0375100-00	Rice	mitochondrion	0.0	0.0
Os05t0522500-01	Rice	mitochondrion	0.0	0.0
Os05t0532600-01	Rice	cytosol	0.0	0.0
Os07t0197100-01	Rice	cytosol	0.0	0.0
Os07t0446800-00	Rice	plastid	0.0	0.0
PGSC0003DMT400000795	Potato	endoplasmic reticulum	0.0	0.0
Os01t0190400-01	Rice	cytosol	0.0	0.0
PGSC0003DMT400042598	Potato	plastid	0.0	0.0
Solyc03g121070.2.1	Tomato	plastid	0.0	0.0
Solyc06g066440.2.1	Tomato	plastid	0.0	0.0
Solyc12g008510.1.1	Tomato	plastid	0.0	0.0
TraesCS3A01G286200.1	Wheat	mitochondrion, plastid	0.0	0.0
TraesCS3B01G320500.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	0.0	0.0
TraesCS3D01G286000.1	Wheat	mitochondrion, plastid	0.0	0.0
VIT_09s0002g03390.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	0.0	0.0
VIT_11s0016g03070.t01	Wine grape	plastid	0.0	0.0
Zm00001d043607_P001	Maize	plasma membrane	0.0	0.0
GSMUA_Achr3P31700_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	0.0	0.0
AT4G29130.1	Thale cress	plastid	0.0	0.0
Bra031105.1-P	Field mustard	cytosol	0.0	0.0
Bra036699.1-P	Field mustard	plastid	0.0	0.0
Bra039025.1-P	Field mustard	cytosol	0.0	0.0
CDX82746	Canola	cytosol	0.0	0.0
CDY03331	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	0.0	0.0
CDY35895	Canola	plastid	0.0	0.0
CDY48733	Canola	plastid	0.0	0.0
EES03543	Sorghum	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	0.0	0.0
GSMUA_Achr3P16320_001	Banana	plastid	0.0	0.0
AT2G19860.1	Thale cress	cytosol	0.0	0.0
GSMUA_Achr6P26380_001	Banana	plastid	0.0	0.0
GSMUA_Achr8P27620_001	Banana	plastid	0.0	0.0
HORVU3Hr1G068620.6	Barley	cytosol	0.0	0.0
KRH41490	Soybean	endoplasmic reticulum	0.0	0.0
KRH44270	Soybean	endoplasmic reticulum	0.0	0.0
KRH47202	Soybean	cytosol	0.0	0.0
KRH48988	Soybean	nucleus	0.0	0.0
KRH60208	Soybean	endoplasmic reticulum	0.0	0.0
KRH74246	Soybean	plastid	0.0	0.0
KRH74248	Soybean	nucleus	0.0	0.0

Protein Annotations

Gene3D:3.50.30.40	MapMan:35.1	EntrezGene:4324667	ProteinID:BAB84438.1	ProteinID:BAB89492.1	ProteinID:BAF06017.2
ProteinID:BAS74099.1	ProteinID:EAZ13382.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008428	GO:GO:0008948	GO:GO:0009987
GO:GO:0016740	GO:GO:0016829	GO:GO:0030234	GO:GO:0032259	GO:GO:0043086	GO:GO:0046872
GO:GO:0047443	GO:GO:0051252	EnsemblPlantsGene:Os01g0722800	EnsemblPlants:Os01t0722800-00	PFAM:PF03737	PANTHER:PTHR33254
PANTHER:PTHR33254:SF15	UniProt:Q8W0C5	InterPro:RraA	InterPro:RraA/RraA-like	InterPro:RraA/RraA-like_sf	SUPFAM:SSF89562
TIGRFAMs:TIGR01935	UniParc:UPI00000A5973	RefSeq:XP_015614808.1	:	:	:

Description

Dimethylmenaquinone methyltransferase family protein. (Os01t0722800-00)

Coordinates

chr1:+:30135889..30137738

Molecular Weight (calculated)

18065.9 Da

IEP (calculated)

5.231

GRAVY (calculated)

0.064

Length

168 amino acids

Sequence
(BLAST)

001: MAALPLATAE VCDANADLIM NGELRALQPI FQIYGRRQVF AGPIVTLKVY EDNVLIREFL EEKGHGRVLV VDGGGSLRCA ILGGNPVQQA QNNGWAGIVV
101: NGCIRDVDEI NGCDIGVRAL NSHPMKANKK GIGEKHVPVT IAGTRICDGE WLYADTDGIL ISRTELTV

Best Arabidopsis Sequence Match ( AT5G16450.2 )
(BLAST)

001: MAFVTTAEVC DANQELIRSG QLRALQPIFQ IYGRRQIFSG PVVTVKVFED NGLIRQFIEE KGNGRVLVVD GGGSQRCAIL GGNPVVQAQN NGWAGIVVNG
101: CIRDVDEING CDIGVRALAS HPIKASKKGL GEQRVPVNIA GTRICDGEWL YADTDGILVS QIELSV

Arabidopsis Description

Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFE0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.