CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX73218
CDX74294
CDX87646
CDX91952
CDY28690
CDY66736
CDY68122

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G29130.1	CDX73218	AT1G76030.1	21798944
AT4G29130.1	CDX87646	AT1G76030.1	21798944
AT4G29130.1	CDX74294	AT3G01280.1	17965176
AT4G29130.1	CDX91952	AT3G01280.1	17965176
AT4G29130.1	CDY28690	AT3G01280.1	17965176
AT4G29130.1	CDY66736	AT3G01280.1	17965176
AT4G29130.1	CDY68122	AT3G01280.1	17965176

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35895	Canola	plastid	98.8	98.6
CDY03331	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	91.98	91.98
CDY48733	Canola	plastid	91.78	91.78
AT4G29130.1	Thale cress	plastid	88.58	89.11
VIT_11s0016g03070.t01	Wine grape	plastid	78.16	78.47
KRH41490	Soybean	endoplasmic reticulum	76.15	76.31
Solyc12g008510.1.1	Tomato	plastid	76.15	76.15
KRH74246	Soybean	plastid	75.55	76.01
PGSC0003DMT400000795	Potato	endoplasmic reticulum	75.75	75.75
KRH60208	Soybean	endoplasmic reticulum	75.55	75.7
GSMUA_Achr6P26380_001	Banana	plastid	74.95	74.8
GSMUA_Achr3P16320_001	Banana	plastid	74.75	74.6
KRH48988	Soybean	nucleus	74.15	74.3
KRH74248	Soybean	nucleus	71.94	72.38
GSMUA_Achr3P31700_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	70.74	71.6
TraesCS1D01G355200.2	Wheat	plastid	70.34	71.2
TraesCS1B01G366400.1	Wheat	mitochondrion	70.34	71.2
CDX81950	Canola	mitochondrion	12.83	68.09
HORVU0Hr1G001440.2	Barley	cytosol, mitochondrion	69.34	66.54
Zm00001d038792_P001	Maize	plasma membrane	66.53	65.48
TraesCS1B01G355600.1	Wheat	golgi	66.33	65.29
Os01t0742500-01	Rice	mitochondrion	66.13	65.22
EES03587	Sorghum	plastid	65.93	65.02
TraesCS1D01G344600.1	Wheat	plastid	65.73	64.69
EES18534	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	65.73	64.69
TraesCS3B01G320500.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	48.1	64.69
Zm00001d043511_P001	Maize	mitochondrion	65.53	64.62
Os05t0187100-02	Rice	cytosol	59.92	64.58
Zm00001d010796_P001	Maize	plasma membrane	65.73	64.44
Os01t0190400-01	Rice	cytosol	58.52	63.76
Os05t0522500-01	Rice	mitochondrion	64.53	63.51
TraesCS3D01G286000.1	Wheat	mitochondrion, plastid	62.93	63.43
EES19165	Sorghum	cytosol	57.92	62.96
TraesCS3B01G309700.3	Wheat	plastid	63.93	62.92
HORVU3Hr1G070690.1	Barley	plasma membrane	63.93	62.67
TraesCS1B01G142000.1	Wheat	cytosol	58.12	62.63
TraesCS1D01G123700.1	Wheat	cytosol	58.12	62.63
TraesCS3D01G276000.3	Wheat	plastid	63.33	62.33
EES03543	Sorghum	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	62.73	62.1
Zm00001d037689_P001	Maize	cytosol, extracellular	57.11	62.09
TraesCS3D01G110300.2	Wheat	cytosol	57.11	61.96
Os01t0722700-01	Rice	plastid	36.27	61.56
HORVU1Hr1G028200.1	Barley	cytosol	57.11	61.56
GSMUA_Achr8P27620_001	Banana	plastid	72.75	61.42
TraesCS3B01G127500.1	Wheat	cytosol	56.11	61.0
Zm00001d043607_P001	Maize	plasma membrane	61.12	60.52
Os05t0532600-01	Rice	cytosol	15.83	58.52
CDY37135	Canola	plastid	10.82	58.06
HORVU1Hr1G075680.2	Barley	plastid	52.71	57.42
HORVU3Hr1G068620.6	Barley	cytosol	62.12	56.57
Zm00001d039512_P010	Maize	extracellular	56.91	56.46
EES00147	Sorghum	cytosol	57.31	55.53
Os07t0446800-00	Rice	plastid	55.11	55.22
GSMUA_Achr6P05500_001	Banana	plastid	55.71	54.94
CDY45062	Canola	plastid	50.9	52.05
CDY22797	Canola	plastid	51.9	52.01
CDY03607	Canola	plastid	50.7	51.84
CDY07303	Canola	plastid	51.1	51.2
CDY37134	Canola	endoplasmic reticulum, extracellular	43.29	50.94
CDY29586	Canola	cytosol	41.28	50.61
CDY06724	Canola	plastid	50.1	50.3
CDY68234	Canola	endoplasmic reticulum, extracellular, mitochondrion	41.88	50.12
CDY20902	Canola	plastid	49.7	50.0
CDY20557	Canola	extracellular, vacuole	13.03	50.0
CDY25373	Canola	plastid	49.7	49.11
CDY24565	Canola	plastid	49.1	48.51
TraesCS7A01G479500.1	Wheat	cytosol, endoplasmic reticulum	9.62	47.06
CDY34475	Canola	cytosol	14.63	45.62
CDX69335	Canola	plastid	38.88	41.45
CDY49677	Canola	cytosol, mitochondrion, plastid	40.48	41.06
CDX75678	Canola	plastid	38.28	40.81
CDX90402	Canola	cytosol, mitochondrion, plastid	39.88	40.61
Os01t0722800-00	Rice	cytosol, plasma membrane	0.0	0.0

Protein Annotations

KEGG:00010+2.7.1.1	KEGG:00051+2.7.1.1	KEGG:00052+2.7.1.1	KEGG:00500+2.7.1.1	KEGG:00520+2.7.1.1	KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1	MapMan:3.1.4.3	Gene3D:3.30.420.40	Gene3D:3.40.367.20	GO:A0A078D029	EnsemblPlants:CDX82746
ProteinID:CDX82746	ProteinID:CDX82746.1	GO:GO:0000166	GO:GO:0001678	GO:GO:0003674	GO:GO:0003824
GO:GO:0004396	GO:GO:0005488	GO:GO:0005524	GO:GO:0005536	GO:GO:0005575	GO:GO:0005623
GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0016773
GO:GO:0019725	GO:GO:0030246	EnsemblPlantsGene:GSBRNA2T00138056001	InterPro:Hexokinase	InterPro:Hexokinase_BS	InterPro:Hexokinase_C
InterPro:Hexokinase_N	InterPro:IPR001312	PFAM:PF00349	PFAM:PF03727	PRINTS:PR00475	ScanProsite:PS00378
PFscan:PS51748	PANTHER:PTHR19443	PANTHER:PTHR19443:SF52	SUPFAM:SSF53067	TMHMM:TMhelix	UniParc:UPI00000A6816
SEG:seg	:	:	:	:	:

Description

BnaC07g01200D

Coordinates

chrLK031829:+:1905365..1908946

Molecular Weight (calculated)

53935.1 Da

IEP (calculated)

5.798

GRAVY (calculated)

0.024

Length

499 amino acids

Sequence
(BLAST)

001: MGKVAVGATV VCAAAVCAAS VYIVRRRMQS SGKWARVIEI LRVLEEDCAT PIGKLRQVAD AMTVEMHAGL ASEGGSKLKM LISYVDNLPS GEEHGFFYAL
101: DLGGTNFRVM RVLLGGKQGR VVKQEAKEVS IPPHLMTSGS DELFNFIAEA LANFVATEGE DFHLPEGRQR ELGFTFSFPV KQTSLSSGTL IKWTKGFSIE
201: DTVGQDVVGA LVKAMERVGL DMNVTALVND TVGTLAGGRY YNPDVVAAVI LGTGTNAAYV ERAHAIPKWH GLLPKSGEMV INMEWGNFRS SHLPLTEYDH
301: LLDFDSLNPG EQILEKIISG MYLGEILRRV LLKMADEAAF FGDSVPPKLR IPFIIRTPNM SAMHSDTSPD LKVVGSKLKD ILEVPTTSLK MRKVVVSLCD
401: IIACRGARLS AAGIYGILKK LGRDAPKDGE TQKSVIAMDG GLFEHYTQFS ECMESSLKEL LGDEASDSVE VIHSNDGSGV GAALLAASHS QYLDDSQTS

Best Arabidopsis Sequence Match ( AT4G29130.1 )
(BLAST)

001: MGKVAVGATV VCTAAVCAVA VLVVRRRMQS SGKWGRVLAI LKAFEEDCAT PISKLRQVAD AMTVEMHAGL ASDGGSKLKM LISYVDNLPS GDEKGLFYAL
101: DLGGTNFRVM RVLLGGKQER VVKQEFEEVS IPPHLMTGGS DELFNFIAEA LAKFVATECE DFHLPEGRQR ELGFTFSFPV KQTSLSSGSL IKWTKGFSIE
201: EAVGQDVVGA LNKALERVGL DMRIAALVND TVGTLAGGRY YNPDVVAAVI LGTGTNAAYV ERATAIPKWH GLLPKSGEMV INMEWGNFRS SHLPLTEFDH
301: TLDFESLNPG EQILEKIISG MYLGEILRRV LLKMAEDAAF FGDTVPSKLR IPFIIRTPHM SAMHNDTSPD LKIVGSKIKD ILEVPTTSLK MRKVVISLCN
401: IIATRGARLS AAGIYGILKK LGRDTTKDEE VQKSVIAMDG GLFEHYTQFS ECMESSLKEL LGDEASGSVE VTHSNDGSGI GAALLAASHS LYLEDS

Arabidopsis Description

HXK1Phosphotransferase [Source:UniProtKB/TrEMBL;Acc:Q0WLE0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.