CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69335	Canola	plastid	95.51	95.51
Bra011789.1-P	Field mustard	mitochondrion	94.87	95.28
CDY49677	Canola	cytosol, mitochondrion, plastid	87.39	83.13
CDX90402	Canola	cytosol, mitochondrion, plastid	86.75	82.86
AT4G37840.1	Thale cress	plastid	83.33	79.11
VIT_00s2422g00010.t01	Wine grape	cytosol	23.29	61.24
VIT_00s0824g00010.t01	Wine grape	plastid	55.34	52.54
PGSC0003DMT400078702	Potato	plastid	54.7	52.14
Solyc02g091830.2.1	Tomato	plastid	54.49	51.93
KRH04349	Soybean	endoplasmic reticulum, mitochondrion	54.27	51.84
KRH58185	Soybean	endoplasmic reticulum, mitochondrion	52.99	50.61
CDY48733	Canola	plastid	41.45	38.88
CDY03331	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.03	38.48
CDX82746	Canola	cytosol	40.81	38.28
CDY35895	Canola	plastid	40.81	38.2
CDY34475	Canola	cytosol	12.82	37.5
CDY06724	Canola	plastid	37.18	35.01
CDY20557	Canola	extracellular, vacuole	9.62	34.62
CDY20902	Canola	plastid	36.32	34.27
CDY22797	Canola	plastid	34.83	32.73
CDY45062	Canola	plastid	33.97	32.58
CDY03607	Canola	plastid	33.76	32.38
CDY07303	Canola	plastid	34.4	32.33
CDY37135	Canola	plastid	6.41	32.26
CDY29586	Canola	cytosol	27.99	32.19
CDY37134	Canola	endoplasmic reticulum, extracellular	28.85	31.84
CDY25373	Canola	plastid	34.19	31.68
CDY68234	Canola	endoplasmic reticulum, extracellular, mitochondrion	27.78	31.18
CDY24565	Canola	plastid	33.55	31.09
CDX81950	Canola	mitochondrion	6.2	30.85

Protein Annotations

KEGG:00010+2.7.1.1	KEGG:00051+2.7.1.1	KEGG:00052+2.7.1.1	KEGG:00500+2.7.1.1	KEGG:00520+2.7.1.1	KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1	MapMan:3.1.4.3	Gene3D:3.30.420.40	Gene3D:3.40.367.20	GO:A0A078CKU1	EnsemblPlants:CDX75678
ProteinID:CDX75678	ProteinID:CDX75678.1	ncoils:Coil	GO:GO:0000166	GO:GO:0001678	GO:GO:0003674
GO:GO:0003824	GO:GO:0004396	GO:GO:0005488	GO:GO:0005524	GO:GO:0005536	GO:GO:0005575
GO:GO:0005623	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0016773	GO:GO:0019725	GO:GO:0030246	EnsemblPlantsGene:GSBRNA2T00121612001	InterPro:Hexokinase
InterPro:Hexokinase_C	InterPro:Hexokinase_N	InterPro:IPR001312	PFAM:PF00349	PFAM:PF03727	PRINTS:PR00475
PFscan:PS51748	PANTHER:PTHR19443	PANTHER:PTHR19443:SF18	SUPFAM:SSF53067	TMHMM:TMhelix	UniParc:UPI0004EE985B
SEG:seg	:	:	:	:	:

Description

BnaA01g00240D

Coordinates

chrLK031804:-:2321135..2323351

Molecular Weight (calculated)

51245.8 Da

IEP (calculated)

6.388

GRAVY (calculated)

-0.109

Length

468 amino acids

Sequence
(BLAST)

001: MSRKVVVVAV TAATVAAAVI IGRWMRRKER RRKQTQRILR KFARECATPV SKLWTVAEAM VADMAASLAA TTAAESRGSL NMLVSFAGSL PSGDEKGLHY
101: GANLRGKELL LLRGTLGGNE EPISDIHKQE ISIPKDVLNG SFKELCDFIS LEQVKFRGMN PGEETEDVKN LGFTLTRYVE EIRSGSISAI HRKSLADGDD
201: DKVLKEFVND MNESLDRHGL KIRMNMALVD DTIGILAGGR YYHKDTVAAV TLGMGTNAAY IEQAQEVLRW KSTIPNEQQE IVISTEWGDF RSCHLPLTEF
301: DAALDAESLN PGSHVFEKMV SGGYLGDIVR RVLLRMSEES ALFGDILPPK LKTPYILGSP DMAAMHQDIS EDRDIVNKKL KEVFGIMDST LAAREVVVEV
401: CDVVAERAAR VAGAGIVGMI KKLGRNYLHS SVWEMLGDEL SDHVVIEHSH GGSGAGALFF AACGNVKI

Best Arabidopsis Sequence Match ( AT4G37840.1 )
(BLAST)

001: MTRKEVVLAV TAATITAVAA GVLMGRWIRR KERRLKHTQR ILRKFARECA TPVSKLWAVA DALVADMTAS LTAECCGSLN MLVSFTGSLP SGDEKGVHYG
101: VNLRGKELLL LRGTLGGNEE PISDVQKHEI PIPDDVLNGS FKELCDFISL ELVKFLAMNP GGEAEEVKNL GFTLTRSVEQ IGSHSISSIH RKSLANDDDE
201: KVLKDLVNDM NESLETHGLK IRMNTALVDN TIGELAGGRY YHKDTVAAVS LGMGTNAAYI EQAQEISRWK SAIREPQEIV VSTEWGDFRS CHLPITEFDA
301: SLDAESLNPG HRIFEKMVSG RYLGEIVRRV LLKMSEESAL FGDTLPPKLT IPYILWSPDM AAMHQDISEE RETVNKKLKE VFGIMDSTLA AREVVVEVCD
401: VVAERAARLA GAGIVGMIKK LGRLEKKMSI VIVEGGLYDH YRVFRNYLHS SVWEMLGDEL SDHVVIEHSH GGSAAGALFL AACGDGHQDS ESK

Arabidopsis Description

HKL3Probable hexokinase-like 2 protein [Source:UniProtKB/Swiss-Prot;Acc:Q9T071]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.