CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX89318
CDX94304
CDX97358

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G50460.1	CDX89318	AT4G26630.1	25387881
AT1G50460.1	CDX94304	AT4G26630.1	25387881
AT1G50460.1	CDX97358	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22797	Canola	plastid	97.85	18.27
Bra018850.1-P	Field mustard	plastid	96.77	18.07
CDY03607	Canola	plastid	90.32	17.21
CDY45062	Canola	plastid	88.17	16.8
AT1G50460.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	88.17	16.47
CDY07303	Canola	plastid	84.95	15.86
CDY24565	Canola	plastid	72.04	13.27
KRH27814	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	70.97	13.25
CDY25373	Canola	plastid	70.97	13.07
KRH29072	Soybean	plastid	69.89	12.9
KRH77671	Soybean	plastid	68.82	12.85
KRH24099	Soybean	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	66.67	12.3
VIT_06s0061g00040.t01	Wine grape	plastid	67.74	12.05
PGSC0003DMT400034299	Potato	endoplasmic reticulum	65.59	11.91
Solyc11g065220.1.1	Tomato	endoplasmic reticulum	64.52	11.74
GSMUA_Achr1P11390_001	Banana	plastid	63.44	11.71
TraesCS3B01G525400.2	Wheat	plastid	62.37	11.46
TraesCS3A01G480900.1	Wheat	plastid	62.37	11.44
Zm00001d042146_P002	Maize	mitochondrion, plastid	60.22	11.27
Zm00001d011889_P001	Maize	mitochondrion	60.22	11.27
TraesCS3D01G475600.1	Wheat	plastid	61.29	11.26
CDY48733	Canola	plastid	59.14	11.02
GSMUA_Achr8P29510_001	Banana	endoplasmic reticulum, mitochondrion	60.22	10.89
CDX82746	Canola	cytosol	58.06	10.82
CDY03331	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	58.06	10.82
GSMUA_Achr11P...	Banana	endoplasmic reticulum	56.99	10.66
CDY35895	Canola	plastid	56.99	10.6
OQU88184	Sorghum	mitochondrion, plastid	61.29	9.69
Os05t0375100-00	Rice	mitochondrion	50.54	9.33
TraesCS1D01G237400.1	Wheat	plastid	47.31	8.8
HORVU1Hr1G057760.1	Barley	plastid	45.16	8.4
TraesCS1B01G248900.1	Wheat	mitochondrion, plastid	45.16	8.4
OQU77891	Sorghum	plastid	45.16	8.38
Zm00001d037861_P001	Maize	plastid	45.16	8.35
TraesCS1A01G234700.1	Wheat	mitochondrion, plastid	41.94	7.88
CDX69335	Canola	plastid	34.41	6.84
HORVU3Hr1G105380.4	Barley	cytosol	34.41	6.67
CDX75678	Canola	plastid	32.26	6.41
CDY20902	Canola	plastid	33.33	6.25
CDY06724	Canola	plastid	32.26	6.04
CDX90402	Canola	cytosol, mitochondrion, plastid	30.11	5.71
CDY49677	Canola	cytosol, mitochondrion, plastid	30.11	5.69
CDY37134	Canola	endoplasmic reticulum, extracellular	11.83	2.59
CDY34475	Canola	cytosol	4.3	2.5
CDY20557	Canola	extracellular, vacuole	2.15	1.54
CDY68234	Canola	endoplasmic reticulum, extracellular, mitochondrion	4.3	0.96
CDX81950	Canola	mitochondrion	0.0	0.0
Os01t0940100-01	Rice	mitochondrion	0.0	0.0
CDY29586	Canola	cytosol	0.0	0.0
GSMUA_AchrUn_...	Banana	cytosol	0.0	0.0

Protein Annotations

KEGG:00010+2.7.1.1	KEGG:00051+2.7.1.1	KEGG:00052+2.7.1.1	KEGG:00500+2.7.1.1	KEGG:00520+2.7.1.1	KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1	Gene3D:3.40.367.20	MapMan:35.1	GO:A0A078HFG9	UniProt:A0A078HFG9	EnsemblPlants:CDY37135
ProteinID:CDY37135	ProteinID:CDY37135.1	GO:GO:0000166	GO:GO:0001678	GO:GO:0003674	GO:GO:0003824
GO:GO:0004396	GO:GO:0005488	GO:GO:0005524	GO:GO:0005536	GO:GO:0005575	GO:GO:0005623
GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0016773	GO:GO:0019725	GO:GO:0030246	GO:GO:0046835	EnsemblPlantsGene:GSBRNA2T00063371001	InterPro:Hexokinase
InterPro:Hexokinase_N	InterPro:IPR001312	PFAM:PF00349	PFscan:PS51257	PANTHER:PTHR19443	PANTHER:PTHR19443:SF6
SUPFAM:SSF53067	TMHMM:TMhelix	UniParc:UPI0004EEFB50	SEG:seg	:	:

Description

BnaC06g03640DPhosphotransferase [Source:UniProtKB/TrEMBL;Acc:A0A078HFG9]

Coordinates

chrLK032392:-:238811..239497

Molecular Weight (calculated)

10054.7 Da

IEP (calculated)

10.652

GRAVY (calculated)

0.332

Length

93 amino acids

Sequence
(BLAST)

1: MGKVAVAFAA AAVVAACSVA AVMVRRRVKS RRKWRSVVEI LKELEEGCDT PVGRLRQVVD AMAVEMHAGL ASEGGSKLKM LLTFVHELPK GFM

Best Arabidopsis Sequence Match ( AT1G50460.2 )
(BLAST)

001: MGKVAVAFAA VAVVAACSVA AVMVGRRMKS RRKWRTVVEI LKELEDDCDT PVGRLRQVVD AMAVEMHAGL ASEGGSKLKM LLTFVDDLPT GREKGTYYAL
101: HLGGTYFRIL RVLLGDQRSY LDVQDVERHP IPSHLMNSTS EVLFNFLAFS LERFIEKEEN GSDSQGVRRE LAFTFSFPVK HTSISSGVLI KWTKGFEISE
201: MVGQDIAECL QGALNRRGLD MHVAALVNDT VGALSLGYYH DPDTVVAVVF GTGSNACYLE RTDAIIKCQG LLTTSGSMVV NMEWGNFWSS HLPRTSYDID
301: LDAESSNAND MGFEKMISGM YLGDIVRRVI LRMSEDSDIF GPISPVLSEP YVLRCLSSFY LLLEI

Arabidopsis Description

HKL1Hexokinase-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS1]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.