CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75678	Canola	plastid	95.51	95.51
CDY49677	Canola	cytosol, mitochondrion, plastid	87.82	83.54
CDX90402	Canola	cytosol, mitochondrion, plastid	86.54	82.65
AT4G37840.1	Thale cress	plastid	82.69	78.5
VIT_00s2422g00010.t01	Wine grape	cytosol	23.5	61.8
VIT_00s0824g00010.t01	Wine grape	plastid	56.2	53.35
PGSC0003DMT400078702	Potato	plastid	55.77	53.16
Solyc02g091830.2.1	Tomato	plastid	55.56	52.95
KRH04349	Soybean	endoplasmic reticulum, mitochondrion	54.91	52.45
KRH58185	Soybean	endoplasmic reticulum, mitochondrion	53.63	51.22
CDY48733	Canola	plastid	41.67	39.08
CDX82746	Canola	cytosol	41.45	38.88
CDY35895	Canola	plastid	41.45	38.8
CDY03331	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.24	38.68
CDY34475	Canola	cytosol	13.03	38.12
CDY06724	Canola	plastid	37.18	35.01
CDY20557	Canola	extracellular, vacuole	9.62	34.62
CDY20902	Canola	plastid	36.54	34.48
CDY37135	Canola	plastid	6.84	34.41
CDY22797	Canola	plastid	35.04	32.93
CDY45062	Canola	plastid	34.19	32.79
CDY03607	Canola	plastid	33.97	32.58
CDY07303	Canola	plastid	34.4	32.33
CDY25373	Canola	plastid	34.4	31.88
CDY29586	Canola	cytosol	27.56	31.7
CDY37134	Canola	endoplasmic reticulum, extracellular	28.63	31.6
CDY24565	Canola	plastid	33.76	31.29
CDX81950	Canola	mitochondrion	6.2	30.85
CDY68234	Canola	endoplasmic reticulum, extracellular, mitochondrion	27.35	30.7

Protein Annotations

KEGG:00010+2.7.1.1	KEGG:00051+2.7.1.1	KEGG:00052+2.7.1.1	KEGG:00500+2.7.1.1	KEGG:00520+2.7.1.1	KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1	MapMan:3.1.4.3	Gene3D:3.30.420.40	Gene3D:3.40.367.20	GO:A0A078BX02	EnsemblPlants:CDX69335
ProteinID:CDX69335	ProteinID:CDX69335.1	ncoils:Coil	GO:GO:0000166	GO:GO:0001678	GO:GO:0003674
GO:GO:0003824	GO:GO:0004396	GO:GO:0005488	GO:GO:0005524	GO:GO:0005536	GO:GO:0005575
GO:GO:0005623	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0016773	GO:GO:0019725	GO:GO:0030246	EnsemblPlantsGene:GSBRNA2T00131178001	InterPro:Hexokinase
InterPro:Hexokinase_C	InterPro:Hexokinase_N	InterPro:IPR001312	PFAM:PF00349	PFAM:PF03727	PRINTS:PR00475
PFscan:PS51748	PANTHER:PTHR19443	PANTHER:PTHR19443:SF18	SUPFAM:SSF53067	TMHMM:TMhelix	UniParc:UPI0004EDDB0A
SEG:seg	:	:	:	:	:

Description

BnaC01g01180D

Coordinates

chrLK031789:-:4238091..4240438

Molecular Weight (calculated)

51222.8 Da

IEP (calculated)

6.004

GRAVY (calculated)

-0.077

Length

468 amino acids

Sequence
(BLAST)

001: MTRKVVVVAV TAATVAAAVI IGRWMRRKER RRKQTQRILR KFARECATPV SKLWMVADAM VAEMTASLAA TTASESRGSL NMLVSFAGSL PSGDEKGLRY
101: GANLRGKELL LLRGTLGGNE EPISDVHKQE ISIPEDVLNG SFKELCDYIS LELVKFIGMN PGEETEDVKN LGFTLTRYVE EIRSGSVSAI HRKSLADGDD
201: DKVLKEFVND MNESLDRHGL KIRMNLALVD DTIGILAGGR YYHKDTVAAV TLGMGTNAAY IEQAQEVLRW KSTIPNEPQE IVISTEWGDF RSCHLPLTEF
301: DAALDAESLN PGSHVFEKMA SGGYLGEIVR RVLLRMSVES ALFGDIVPPK LKTPYILGSP DMAAMHQDIS EDRDIVNKKV KEVFGIMDST LAAREVVVEV
401: CDVVAERAAR VAGAGIVGMI KKLGRNYLHS SVWEMLGDEL SDHVVIEHSH GGSGAGALFF AACDNVKI

Best Arabidopsis Sequence Match ( AT4G37840.1 )
(BLAST)

001: MTRKEVVLAV TAATITAVAA GVLMGRWIRR KERRLKHTQR ILRKFARECA TPVSKLWAVA DALVADMTAS LTAECCGSLN MLVSFTGSLP SGDEKGVHYG
101: VNLRGKELLL LRGTLGGNEE PISDVQKHEI PIPDDVLNGS FKELCDFISL ELVKFLAMNP GGEAEEVKNL GFTLTRSVEQ IGSHSISSIH RKSLANDDDE
201: KVLKDLVNDM NESLETHGLK IRMNTALVDN TIGELAGGRY YHKDTVAAVS LGMGTNAAYI EQAQEISRWK SAIREPQEIV VSTEWGDFRS CHLPITEFDA
301: SLDAESLNPG HRIFEKMVSG RYLGEIVRRV LLKMSEESAL FGDTLPPKLT IPYILWSPDM AAMHQDISEE RETVNKKLKE VFGIMDSTLA AREVVVEVCD
401: VVAERAARLA GAGIVGMIKK LGRLEKKMSI VIVEGGLYDH YRVFRNYLHS SVWEMLGDEL SDHVVIEHSH GGSAAGALFL AACGDGHQDS ESK

Arabidopsis Description

HKL3Probable hexokinase-like 2 protein [Source:UniProtKB/Swiss-Prot;Acc:Q9T071]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.