CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX89318
CDX94304
CDX97358

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G50460.1	CDX89318	AT4G26630.1	25387881
AT1G50460.1	CDX94304	AT4G26630.1	25387881
AT1G50460.1	CDX97358	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29586	Canola	cytosol	80.12	98.03
CDY68234	Canola	endoplasmic reticulum, extracellular, mitochondrion	81.93	97.84
CDY22797	Canola	plastid	92.37	92.37
CDY37134	Canola	endoplasmic reticulum, extracellular	78.51	92.22
CDY45062	Canola	plastid	89.76	91.6
CDY03607	Canola	plastid	89.36	91.19
AT1G50460.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	90.76	90.76
CDY37135	Canola	plastid	15.86	84.95
CDY24565	Canola	plastid	78.11	77.03
CDY25373	Canola	plastid	77.31	76.24
CDY34475	Canola	cytosol	23.9	74.38
CDY20557	Canola	extracellular, vacuole	18.67	71.54
KRH77671	Soybean	plastid	69.48	69.48
KRH29072	Soybean	plastid	70.28	69.44
KRH27814	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	69.28	69.28
KRH24099	Soybean	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	69.08	68.25
VIT_06s0061g00040.t01	Wine grape	plastid	69.28	65.97
PGSC0003DMT400034299	Potato	endoplasmic reticulum	67.67	65.82
Solyc11g065220.1.1	Tomato	endoplasmic reticulum	67.07	65.36
Os01t0940100-01	Rice	mitochondrion	43.17	60.22
GSMUA_Achr8P29510_001	Banana	endoplasmic reticulum, mitochondrion	61.65	59.73
GSMUA_Achr1P11390_001	Banana	plastid	60.04	59.33
Zm00001d042146_P002	Maize	mitochondrion, plastid	58.84	58.95
GSMUA_Achr11P...	Banana	endoplasmic reticulum	58.84	58.95
Zm00001d011889_P001	Maize	mitochondrion	58.03	58.15
GSMUA_AchrUn_...	Banana	cytosol	47.59	57.95
TraesCS3A01G480900.1	Wheat	plastid	58.43	57.4
TraesCS3B01G525400.2	Wheat	plastid	58.03	57.11
TraesCS3D01G475600.1	Wheat	plastid	57.43	56.52
HORVU3Hr1G105380.4	Barley	cytosol	53.21	55.21
OQU77891	Sorghum	plastid	51.81	51.5
CDX82746	Canola	cytosol	51.2	51.1
Os05t0375100-00	Rice	mitochondrion	51.61	50.99
CDY35895	Canola	plastid	51.0	50.8
Zm00001d037861_P001	Maize	plastid	51.2	50.7
CDY48733	Canola	plastid	50.6	50.5
CDY03331	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	50.4	50.3
HORVU1Hr1G057760.1	Barley	plastid	50.4	50.2
OQU88184	Sorghum	mitochondrion, plastid	59.24	50.17
TraesCS1A01G234700.1	Wheat	mitochondrion, plastid	49.0	49.29
TraesCS1B01G248900.1	Wheat	mitochondrion, plastid	49.4	49.2
TraesCS1D01G237400.1	Wheat	plastid	49.2	49.0
CDY06724	Canola	plastid	43.57	43.66
CDY20902	Canola	plastid	43.37	43.55
CDX81950	Canola	mitochondrion	6.83	36.17
CDY49677	Canola	cytosol, mitochondrion, plastid	34.74	35.16
CDX90402	Canola	cytosol, mitochondrion, plastid	33.94	34.49
CDX75678	Canola	plastid	32.33	34.4
CDX69335	Canola	plastid	32.33	34.4

Protein Annotations

KEGG:00010+2.7.1.1	KEGG:00051+2.7.1.1	KEGG:00052+2.7.1.1	KEGG:00500+2.7.1.1	KEGG:00520+2.7.1.1	KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1	MapMan:3.1.4.3	Gene3D:3.30.420.40	Gene3D:3.40.367.20	GO:A0A078F6L8	UniProt:A0A078F6L8
EnsemblPlants:CDY07303	ProteinID:CDY07303	ProteinID:CDY07303.1	GO:GO:0000166	GO:GO:0001678	GO:GO:0003674
GO:GO:0003824	GO:GO:0004396	GO:GO:0005488	GO:GO:0005524	GO:GO:0005536	GO:GO:0005575
GO:GO:0005623	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0016773	GO:GO:0019725	GO:GO:0030246	GO:GO:0046835	EnsemblPlantsGene:GSBRNA2T00124203001
InterPro:Hexokinase	InterPro:Hexokinase_C	InterPro:Hexokinase_N	InterPro:IPR001312	PFAM:PF00349	PFAM:PF03727
PRINTS:PR00475	PFscan:PS51257	PFscan:PS51748	PANTHER:PTHR19443	PANTHER:PTHR19443:SF6	SUPFAM:SSF53067
TMHMM:TMhelix	UniParc:UPI0004EE5B66	SEG:seg	:	:	:

Description

BnaC05g26650DPhosphotransferase [Source:UniProtKB/TrEMBL;Acc:A0A078F6L8]

Coordinates

chrLK031977:+:321135..324434

Molecular Weight (calculated)

54456.0 Da

IEP (calculated)

7.675

GRAVY (calculated)

0.026

Length

498 amino acids

Sequence
(BLAST)

001: MGKVAVAFAA AAVLVSCSVA AVMVGRRIKS RAKWRAVVEI LKEMEEACRT PVGRLRQVVD AMAVEMHAGL ASEGGSKLKM LLTFVHHLPN GTEKGTYYAL
101: HLGGTYFRIL RVHLGGERSY LDVQDVERHP IPSHLMNSTS EVLFNFLAFS MERFIEKEGK ESNSQGVKRE LAFTFSFPVK HSSISSGVLI KWTKGFEISE
201: MVGKDVAECL QGALNRRGLD IHVAALVNDT VGALSLGYYH DPDTVVAVVF GTGSNACYLE RTDAIIKSQG LLTTSGSVVV NMEWGNFWSS HLPRTSYDID
301: LDAESSNPND MGFEKMIAGL YLGDIVRRVI RHMSQVSDIF GPTSSMLSEP YVLRTNSVSA MHEDDTPELQ QVARILKDLG VSDVPLKVRK LVVKICDVVT
401: RRAGRLAAAG IAGILKKVGR DGSGGITSGR SRSEMRMQKR TVVAVEGGLY MNYTMFREYM EEALVEILGE EVSQYVVVKA MEDGSSIGSA LLVASLQS

Best Arabidopsis Sequence Match ( AT1G50460.1 )
(BLAST)

001: MGKVAVAFAA VAVVAACSVA AVMVGRRMKS RRKWRTVVEI LKELEDDCDT PVGRLRQVVD AMAVEMHAGL ASEGGSKLKM LLTFVDDLPT GREKGTYYAL
101: HLGGTYFRIL RVLLGDQRSY LDVQDVERHP IPSHLMNSTS EVLFNFLAFS LERFIEKEEN GSDSQGVRRE LAFTFSFPVK HTSISSGVLI KWTKGFEISE
201: MVGQDIAECL QGALNRRGLD MHVAALVNDT VGALSLGYYH DPDTVVAVVF GTGSNACYLE RTDAIIKCQG LLTTSGSMVV NMEWGNFWSS HLPRTSYDID
301: LDAESSNAND MGFEKMISGM YLGDIVRRVI LRMSEDSDIF GPISPVLSEP YVLRTNSVSA IHEDDTPELQ EVARILKDIG VSDVPLKVRK LVVKICDVVT
401: RRAGRLAAAG IAGILKKIGR DGSGGITSGR SRSEIQMQKR TVVAVEGGLY MNYTMFREYM EEALVEILGE EVSQYVVVKA MEDGSSIGSA LLVASLQS

Arabidopsis Description

HKL1Hexokinase-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS1]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.