CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX89318
CDX94304
CDX97358

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G50460.1	CDX89318	AT4G26630.1	25387881
AT1G50460.1	CDX94304	AT4G26630.1	25387881
AT1G50460.1	CDX97358	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45062	Canola	plastid	98.36	98.36
Bra014254.1-P	Field mustard	plastid	98.36	96.19
CDY29586	Canola	cytosol	75.41	90.42
CDY37135	Canola	plastid	17.21	90.32
CDY22797	Canola	plastid	91.8	89.96
CDY07303	Canola	plastid	91.19	89.36
CDY68234	Canola	endoplasmic reticulum, extracellular, mitochondrion	76.02	88.97
AT1G50460.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	90.78	88.96
CDY37134	Canola	endoplasmic reticulum, extracellular	77.05	88.68
CDY24565	Canola	plastid	79.3	76.63
CDY25373	Canola	plastid	78.28	75.64
CDY34475	Canola	cytosol	24.39	74.38
CDY20557	Canola	extracellular, vacuole	18.65	70.0
KRH27814	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	69.47	68.07
KRH77671	Soybean	plastid	69.47	68.07
KRH29072	Soybean	plastid	69.26	67.06
KRH24099	Soybean	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	68.65	66.47
PGSC0003DMT400034299	Potato	endoplasmic reticulum	68.65	65.43
Solyc11g065220.1.1	Tomato	endoplasmic reticulum	67.83	64.77
VIT_06s0061g00040.t01	Wine grape	plastid	68.85	64.24
GSMUA_Achr1P11390_001	Banana	plastid	61.07	59.13
GSMUA_Achr8P29510_001	Banana	endoplasmic reticulum, mitochondrion	62.09	58.95
Os01t0940100-01	Rice	mitochondrion	42.83	58.54
Zm00001d042146_P002	Maize	mitochondrion, plastid	59.02	57.95
Zm00001d011889_P001	Maize	mitochondrion	58.2	57.14
GSMUA_Achr11P...	Banana	endoplasmic reticulum	57.99	56.94
GSMUA_AchrUn_...	Banana	cytosol	47.13	56.23
TraesCS3A01G480900.1	Wheat	plastid	57.99	55.82
TraesCS3B01G525400.2	Wheat	plastid	57.17	55.14
TraesCS3D01G475600.1	Wheat	plastid	56.56	54.55
HORVU3Hr1G105380.4	Barley	cytosol	52.66	53.54
CDX82746	Canola	cytosol	51.84	50.7
Os05t0375100-00	Rice	mitochondrion	52.25	50.6
CDY35895	Canola	plastid	51.64	50.4
CDY48733	Canola	plastid	51.43	50.3
CDY03331	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	51.23	50.1
OQU77891	Sorghum	plastid	50.82	49.5
OQU88184	Sorghum	mitochondrion, plastid	59.22	49.15
Zm00001d037861_P001	Maize	plastid	50.2	48.71
HORVU1Hr1G057760.1	Barley	plastid	49.59	48.4
TraesCS1A01G234700.1	Wheat	mitochondrion, plastid	48.36	47.68
TraesCS1B01G248900.1	Wheat	mitochondrion, plastid	48.57	47.4
TraesCS1D01G237400.1	Wheat	plastid	48.36	47.2
CDY06724	Canola	plastid	44.06	43.26
CDY20902	Canola	plastid	43.65	42.94
CDX81950	Canola	mitochondrion	6.76	35.11
CDY49677	Canola	cytosol, mitochondrion, plastid	34.43	34.15
CDX69335	Canola	plastid	32.58	33.97
CDX75678	Canola	plastid	32.38	33.76
CDX90402	Canola	cytosol, mitochondrion, plastid	33.4	33.27

Protein Annotations

KEGG:00010+2.7.1.1	KEGG:00051+2.7.1.1	KEGG:00052+2.7.1.1	KEGG:00500+2.7.1.1	KEGG:00520+2.7.1.1	KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1	MapMan:3.1.4.3	Gene3D:3.30.420.40	Gene3D:3.40.367.20	GO:A0A078ERE1	EnsemblPlants:CDY03607
ProteinID:CDY03607	ProteinID:CDY03607.1	GO:GO:0000166	GO:GO:0001678	GO:GO:0003674	GO:GO:0003824
GO:GO:0004396	GO:GO:0005488	GO:GO:0005524	GO:GO:0005536	GO:GO:0005575	GO:GO:0005623
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0016773	GO:GO:0019725	GO:GO:0030246	EnsemblPlantsGene:GSBRNA2T00116356001	InterPro:Hexokinase	InterPro:Hexokinase_C
InterPro:Hexokinase_N	InterPro:IPR001312	PFAM:PF00349	PFAM:PF03727	PRINTS:PR00475	PFscan:PS51257
PFscan:PS51748	PANTHER:PTHR19443	PANTHER:PTHR19443:SF6	SUPFAM:SSF53067	TMHMM:TMhelix	UniParc:UPI0004EE7823
SEG:seg	:	:	:	:	:

Description

BnaC03g68660D

Coordinates

chrLK031944:+:834131..837402

Molecular Weight (calculated)

53645.9 Da

IEP (calculated)

6.445

GRAVY (calculated)

0.024

Length

488 amino acids

Sequence
(BLAST)

001: MGKVAVAFAS AAVVAACSVA AVMVRRRVKS RRKWRTVVEI LKEFEEGCDA PVGRLRQVVD AMAVEMHAGL ASEGGSKLKM LLTYVHDLPN GTEKGTYYAL
101: HLGGTYFRIL RVHLGGERSY LDVQDVERHP IPSHLMNSTS EVLFNFLASS LERFIQKEGN ESNSQGVIRE LAFTFSFPVK HTCISSGVLI KWTKGFEISE
201: MVGKDIAECL QGALNRRGLD IHVAALVNDT VGALSLGYYH DPDTVVTVVF GTGSNACYLE RTDAIIKCQG LLTTSGSMVV NMEWGNFWSS HLPRTAYDID
301: LDAESSNPND MGFEKMIAGL YLGDIVRRVI LRMSQESDIF GPSSSVFSQP YVLRTNSVSA MHEDDTPELQ EVARILRDLG LSDVPLKVRK LMVKICDVVT
401: RRAGRLAAAG IAGILKKIGR DGEMQMQRRT VVGVEGGLYM NYTMFREYME EALVEILGEE VSQYVVVKAM EDGSSIGSAL LVASSLQS

Best Arabidopsis Sequence Match ( AT1G50460.1 )
(BLAST)

001: MGKVAVAFAA VAVVAACSVA AVMVGRRMKS RRKWRTVVEI LKELEDDCDT PVGRLRQVVD AMAVEMHAGL ASEGGSKLKM LLTFVDDLPT GREKGTYYAL
101: HLGGTYFRIL RVLLGDQRSY LDVQDVERHP IPSHLMNSTS EVLFNFLAFS LERFIEKEEN GSDSQGVRRE LAFTFSFPVK HTSISSGVLI KWTKGFEISE
201: MVGQDIAECL QGALNRRGLD MHVAALVNDT VGALSLGYYH DPDTVVAVVF GTGSNACYLE RTDAIIKCQG LLTTSGSMVV NMEWGNFWSS HLPRTSYDID
301: LDAESSNAND MGFEKMISGM YLGDIVRRVI LRMSEDSDIF GPISPVLSEP YVLRTNSVSA IHEDDTPELQ EVARILKDIG VSDVPLKVRK LVVKICDVVT
401: RRAGRLAAAG IAGILKKIGR DGSGGITSGR SRSEIQMQKR TVVAVEGGLY MNYTMFREYM EEALVEILGE EVSQYVVVKA MEDGSSIGSA LLVASLQS

Arabidopsis Description

HKL1Hexokinase-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS1]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.