Factsheet for TraesCS1B01G248900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G137900.1
TraesCS4B01G148100.1
TraesCS4D01G153300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G50460.1	TraesCS4A01G137900.1	AT4G26630.1	25387881
AT1G50460.1	TraesCS4B01G148100.1	AT4G26630.1	25387881
AT1G50460.1	TraesCS4D01G153300.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G234700.1	Wheat	mitochondrion, plastid	94.0	94.95
TraesCS1D01G237400.1	Wheat	plastid	94.8	94.8
HORVU1Hr1G057760.1	Barley	plastid	92.6	92.6
OQU77891	Sorghum	plastid	76.8	76.65
Os05t0375100-00	Rice	mitochondrion	75.4	74.8
Zm00001d037861_P001	Maize	plastid	74.2	73.76
TraesCS3B01G525400.2	Wheat	plastid	61.8	61.07
GSMUA_Achr1P11390_001	Banana	plastid	59.4	58.93
GSMUA_AchrUn_...	Banana	cytosol	47.8	58.44
GSMUA_Achr11P...	Banana	endoplasmic reticulum	55.8	56.14
PGSC0003DMT400034299	Potato	endoplasmic reticulum	57.4	56.05
GSMUA_Achr8P29510_001	Banana	endoplasmic reticulum, mitochondrion	57.6	56.03
KRH77671	Soybean	plastid	55.6	55.82
KRH27814	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	55.4	55.62
KRH29072	Soybean	plastid	56.0	55.56
Solyc11g065220.1.1	Tomato	endoplasmic reticulum	56.6	55.38
KRH24099	Soybean	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	55.2	54.76
VIT_06s0061g00040.t01	Wine grape	plastid	55.2	52.77
CDY22797	Canola	plastid	50.2	50.4
CDY37134	Canola	endoplasmic reticulum, extracellular	42.6	50.24
CDY29586	Canola	cytosol	40.8	50.12
Bra035821.1-P	Field mustard	plastid	50.4	49.9
Bra018850.1-P	Field mustard	plastid	49.6	49.8
AT1G50460.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	49.6	49.8
CDY25373	Canola	plastid	50.2	49.7
CDY68234	Canola	endoplasmic reticulum, extracellular, mitochondrion	41.4	49.64
CDY07303	Canola	plastid	49.2	49.4
Bra030490.1-P	Field mustard	plastid	49.2	49.4
CDY24565	Canola	plastid	49.8	49.31
AT3G20040.1	Thale cress	plastid	49.4	49.2
CDY03607	Canola	plastid	47.4	48.57
Bra014254.1-P	Field mustard	plastid	48.4	48.5
CDY45062	Canola	plastid	47.2	48.36
TraesCS1B01G366400.1	Wheat	mitochondrion	47.6	48.28
CDY34475	Canola	cytosol	15.2	47.5
TraesCS3B01G127500.1	Wheat	cytosol	42.8	46.62
TraesCS1B01G142000.1	Wheat	cytosol	42.8	46.22
CDY37135	Canola	plastid	8.4	45.16
TraesCS3B01G320500.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	33.2	44.74
CDY20557	Canola	extracellular, vacuole	11.6	44.62
TraesCS2B01G016000.1	Wheat	mitochondrion, plastid	42.4	42.66
TraesCS1B01G355600.1	Wheat	golgi	43.2	42.6
TraesCS3B01G309700.3	Wheat	plastid	42.0	41.42
CDX81950	Canola	mitochondrion	6.6	35.11

Protein Annotations

KEGG:00010+2.7.1.1	KEGG:00051+2.7.1.1	KEGG:00052+2.7.1.1	KEGG:00500+2.7.1.1	KEGG:00520+2.7.1.1	KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1	MapMan:3.1.4.3	Gene3D:3.30.420.40	Gene3D:3.40.367.20	GO:GO:0000166	GO:GO:0001678
GO:GO:0003674	GO:GO:0003824	GO:GO:0004396	GO:GO:0005488	GO:GO:0005524	GO:GO:0005536
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0016773	GO:GO:0019725	GO:GO:0030246	InterPro:Hexokinase	InterPro:Hexokinase_C	InterPro:Hexokinase_N
InterPro:IPR001312	PFAM:PF00349	PFAM:PF03727	PRINTS:PR00475	PFscan:PS51748	PANTHER:PTHR19443
PANTHER:PTHR19443:SF19	SUPFAM:SSF53067	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1B01G248900	EnsemblPlants:TraesCS1B01G248900.1	TIGR:cd00012
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:440501524..440505003

Molecular Weight (calculated)

54674.8 Da

IEP (calculated)

5.001

GRAVY (calculated)

0.065

Length

500 amino acids

Sequence
(BLAST)

001: MGGAGWLRVA AAAGCAAVTC ALATAMVAQR VVAWRRWLRA MAVLRDVEES FATPTERLER VVNSLAVEMF AGLASEDASK VRMLHTCVDL LPDGSEEGIY
101: YAVDIGGTGF RFLKVELGAG STIINQKIEH QPVKKELMEG TSEDFFNSIA STLKNFIERE GDEGRALGFT FSFPMRQFSI ASGSLIRWTK EFSIEEAIGQ
201: DVAQCLNEAL ERNGLNLKVN ALMNNTVGTL AMGHYYDEDT IAAVIIGAGT NACYIERNEA ITKCQRLLTN SGQTVVNVEW GSFRPPQIPL TPYDICFYNE
301: TPNYYDQGFE KMISGVYLGE IARLVFHKMA QESDVFGTDV DGLAIPFILS TPCLSAIRED DSLDLKEVGR ILEEHLKIHN VPLKTRRLVQ RVCDIITQRA
401: ARLAAAGIVA ILQKLGRDGT LCGTTRVRSI AGVPKRSVIA IEGGLYQEYS LFREYLNEAV LEILGEEIAA TVVLKVVEEG SGVGAALIAA AYSSTRKNSI

Best Arabidopsis Sequence Match ( AT1G50460.3 )
(BLAST)

001: MFTSNHCCYL LPLLWREKGT YYALHLGGTY FRILRVLLGD QRSYLDVQDV ERHPIPSHLM NSTSEVLFNF LAFSLERFIE KEENGSDSQG VRRELAFTFS
101: FPVKHTSISS GVLIKWTKGF EISEMVGQDI AECLQGALNR RGLDMHVAAL VNDTVGALSL GYYHDPDTVV AVVFGTGSNA CYLERTDAII KCQGLLTTSG
201: SMVVNMEWGN FWSSHLPRTS YDIDLDAESS NANDMGFEKM ISGMYLGDIV RRVILRMSED SDIFGPISPV LSEPYVLRTN SVSAIHEDDT PELQEVARIL
301: KDIGVSDVPL KVRKLVVKIC DVVTRRAGRL AAAGIAGILK KIGRDGSGGI TSGRSRSEIQ MQKRTVVAVE GGLYMNYTMF REYMEEALVE ILGEEVSQYV
401: VVKAMEDGSS IGSALLVASL QS

Arabidopsis Description

HKL1Hexokinase-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS1]
SUBAcon: [mitochondrion,plastid,extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.