Factsheet for TraesCS1B01G355600.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, plastid, secretory
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS6A01G186300.1
TraesCS6B01G218100.1
TraesCS6D01G173400.1
TraesCS7A01G362000.1
TraesCS7B01G265500.1
TraesCS7D01G361000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G29130.1	TraesCS6A01G186300.1	AT1G76030.1	21798944
AT4G29130.1	TraesCS6B01G218100.1	AT1G76030.1	21798944
AT4G29130.1	TraesCS6D01G173400.1	AT1G76030.1	21798944
AT4G29130.1	TraesCS7A01G362000.1	AT1G76030.1	21798944
AT4G29130.1	TraesCS7B01G265500.1	AT1G76030.1	21798944
AT4G29130.1	TraesCS7D01G361000.1	AT1G76030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G344600.1	Wheat	plastid	98.03	98.03
TraesCS1A01G342500.1	Wheat	plastid	97.63	97.63
EES18534	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	88.76	88.76
Zm00001d038792_P001	Maize	plasma membrane	88.36	88.36
Zm00001d010796_P001	Maize	plasma membrane	86.59	86.25
Os05t0522500-01	Rice	mitochondrion	86.19	86.19
HORVU1Hr1G075680.2	Barley	plastid	76.33	84.5
TraesCS3B01G309700.3	Wheat	plastid	80.87	80.87
GSMUA_Achr3P16320_001	Banana	plastid	67.65	68.6
TraesCS1B01G366400.1	Wheat	mitochondrion	66.47	68.36
GSMUA_Achr3P31700_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	66.27	68.15
VIT_11s0016g03070.t01	Wine grape	plastid	66.27	67.61
GSMUA_Achr6P26380_001	Banana	plastid	66.67	67.6
Bra039025.1-P	Field mustard	cytosol	66.08	67.0
CDY35895	Canola	plastid	65.88	66.8
CDX82746	Canola	cytosol	65.29	66.33
AT4G29130.1	Thale cress	plastid	64.69	66.13
KRH60208	Soybean	endoplasmic reticulum	64.89	66.06
Solyc12g008510.1.1	Tomato	plastid	64.5	65.53
PGSC0003DMT400000795	Potato	endoplasmic reticulum	64.3	65.33
KRH41490	Soybean	endoplasmic reticulum	64.1	65.26
CDY03331	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	64.1	65.13
Bra036699.1-P	Field mustard	plastid	63.91	64.93
CDY48733	Canola	plastid	63.91	64.93
KRH74246	Soybean	plastid	63.51	64.92
KRH48988	Soybean	nucleus	63.31	64.46
AT2G19860.1	Thale cress	cytosol	63.71	64.34
VIT_09s0002g03390.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	62.92	64.06
TraesCS3B01G320500.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	46.35	63.34
Solyc03g121070.2.1	Tomato	plastid	61.14	62.25
TraesCS1B01G142000.1	Wheat	cytosol	56.8	62.2
PGSC0003DMT400006474	Potato	mitochondrion	60.75	61.97
PGSC0003DMT400042598	Potato	plastid	60.55	61.9
KRH74248	Soybean	nucleus	60.55	61.9
TraesCS3B01G127500.1	Wheat	cytosol	56.02	61.87
Solyc06g066440.2.1	Tomato	plastid	60.16	61.49
KRH44270	Soybean	endoplasmic reticulum	59.37	61.18
GSMUA_Achr8P27620_001	Banana	plastid	63.91	54.82
KRH47202	Soybean	cytosol	42.41	53.09
TraesCS2B01G016000.1	Wheat	mitochondrion, plastid	51.87	52.92
Bra031105.1-P	Field mustard	cytosol	12.82	49.24
TraesCS3B01G525400.2	Wheat	plastid	46.75	46.84
TraesCS1B01G248900.1	Wheat	mitochondrion, plastid	42.6	43.2

Protein Annotations

KEGG:00010+2.7.1.1	KEGG:00051+2.7.1.1	KEGG:00052+2.7.1.1	KEGG:00500+2.7.1.1	KEGG:00520+2.7.1.1	KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1	MapMan:3.1.4.3	Gene3D:3.30.420.40	Gene3D:3.40.367.20	GO:GO:0000166	GO:GO:0001678
GO:GO:0003674	GO:GO:0003824	GO:GO:0004340	GO:GO:0004396	GO:GO:0005488	GO:GO:0005524
GO:GO:0005536	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009058	GO:GO:0009749	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0016773	GO:GO:0019725	GO:GO:0030246	InterPro:Hexokinase	InterPro:Hexokinase_BS	InterPro:Hexokinase_C
InterPro:Hexokinase_N	InterPro:IPR001312	PFAM:PF00349	PFAM:PF03727	PRINTS:PR00475	ScanProsite:PS00378
PFscan:PS51748	PANTHER:PTHR19443	PANTHER:PTHR19443:SF15	SUPFAM:SSF53067	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1B01G355600
EnsemblPlants:TraesCS1B01G355600.1	TIGR:cd00012	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1B:+:585069023..585073021

Molecular Weight (calculated)

54774.3 Da

IEP (calculated)

6.522

GRAVY (calculated)

0.023

Length

507 amino acids

Sequence
(BLAST)

001: MGKAAAVGTA VVVCAAVGTA VVLGRRRRRR DAELLGAAEA ERKKKVAAVI EDVERTLATP TALLRGISDA LVLEMERGLR GDMHSQLKML ISYVDNLPTG
101: DEHGLFYALD LGGTNFRVLR VQLGGREKRV AKQQYQEVSI PPHLMVGTSL ELFDFIAAVL AKFVETEGDE FHLPMGRQRE LGFTFSFPVN QLSISSGTLI
201: KWTKGFSING TVGEDVVAEL SKAMERQGLD MKVTALVNDT VGTLAGGRYM DNDVVAAVIL GTGTNAAYVE HANAIPKWTG LLPKSGNMVI NTEWGSFKSD
301: KLPLSEYDKA LDFESLNPGE QIYEKLISGM YLGEIVRRIL LKLAHDAALF GDVVPAKLEL PFVLRTPDMS AMHHDASHDL KILGSKLKDI VGVADTSLEV
401: RYITRHICDI VAERGARLAA AGIYGILKKL GRDKVPTDGS PMQRTVVALD GGLYEHYKKF SSCLEATLSD LLGDEASSSL VAKLANDGSG IGAALLAASH
501: SQYADIY

Best Arabidopsis Sequence Match ( AT4G29130.1 )
(BLAST)

001: MGKVAVGATV VCTAAVCAVA VLVVRRRMQS SGKWGRVLAI LKAFEEDCAT PISKLRQVAD AMTVEMHAGL ASDGGSKLKM LISYVDNLPS GDEKGLFYAL
101: DLGGTNFRVM RVLLGGKQER VVKQEFEEVS IPPHLMTGGS DELFNFIAEA LAKFVATECE DFHLPEGRQR ELGFTFSFPV KQTSLSSGSL IKWTKGFSIE
201: EAVGQDVVGA LNKALERVGL DMRIAALVND TVGTLAGGRY YNPDVVAAVI LGTGTNAAYV ERATAIPKWH GLLPKSGEMV INMEWGNFRS SHLPLTEFDH
301: TLDFESLNPG EQILEKIISG MYLGEILRRV LLKMAEDAAF FGDTVPSKLR IPFIIRTPHM SAMHNDTSPD LKIVGSKIKD ILEVPTTSLK MRKVVISLCN
401: IIATRGARLS AAGIYGILKK LGRDTTKDEE VQKSVIAMDG GLFEHYTQFS ECMESSLKEL LGDEASGSVE VTHSNDGSGI GAALLAASHS LYLEDS

Arabidopsis Description

HXK1Phosphotransferase [Source:UniProtKB/TrEMBL;Acc:Q0WLE0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.