CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

cytosol 3
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX73218
CDX74294
CDX87646
CDX91952
CDY28690
CDY66736
CDY68122

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G29130.1	CDX73218	AT1G76030.1	21798944
AT4G29130.1	CDX87646	AT1G76030.1	21798944
AT4G29130.1	CDX74294	AT3G01280.1	17965176
AT4G29130.1	CDX91952	AT3G01280.1	17965176
AT4G29130.1	CDY28690	AT3G01280.1	17965176
AT4G29130.1	CDY66736	AT3G01280.1	17965176
AT4G29130.1	CDY68122	AT3G01280.1	17965176

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48733	Canola	plastid	98.4	98.4
CDX82746	Canola	cytosol	91.98	91.98
CDY35895	Canola	plastid	91.98	91.8
AT4G29130.1	Thale cress	plastid	87.98	88.51
VIT_11s0016g03070.t01	Wine grape	plastid	77.76	78.07
KRH41490	Soybean	endoplasmic reticulum	77.15	77.31
KRH60208	Soybean	endoplasmic reticulum	76.35	76.51
Solyc12g008510.1.1	Tomato	plastid	76.15	76.15
KRH74246	Soybean	plastid	74.95	75.4
PGSC0003DMT400000795	Potato	endoplasmic reticulum	74.95	74.95
KRH48988	Soybean	nucleus	73.55	73.69
GSMUA_Achr3P16320_001	Banana	plastid	73.15	73.0
GSMUA_Achr6P26380_001	Banana	plastid	72.75	72.6
CDX81950	Canola	mitochondrion	13.63	72.34
KRH74248	Soybean	nucleus	71.54	71.98
Bra031105.1-P	Field mustard	cytosol	19.04	71.97
TraesCS1D01G355200.2	Wheat	plastid	69.54	70.39
TraesCS1B01G366400.1	Wheat	mitochondrion	69.54	70.39
GSMUA_Achr3P31700_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	69.34	70.18
HORVU0Hr1G001440.2	Barley	cytosol, mitochondrion	68.94	66.15
Zm00001d038792_P001	Maize	plasma membrane	65.93	64.89
EES03587	Sorghum	plastid	65.73	64.82
Os01t0742500-01	Rice	mitochondrion	65.53	64.62
TraesCS1B01G355600.1	Wheat	golgi	65.13	64.1
EES18534	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	65.13	64.1
Zm00001d043511_P001	Maize	mitochondrion	64.93	64.03
Os05t0187100-02	Rice	cytosol	59.32	63.93
TraesCS1D01G344600.1	Wheat	plastid	64.93	63.91
Zm00001d010796_P001	Maize	plasma membrane	64.93	63.65
TraesCS3B01G320500.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	47.09	63.34
Os01t0190400-01	Rice	cytosol	58.12	63.32
Os05t0522500-01	Rice	mitochondrion	64.33	63.31
TraesCS3D01G286000.1	Wheat	mitochondrion, plastid	61.72	62.22
TraesCS1B01G142000.1	Wheat	cytosol	57.72	62.2
TraesCS1D01G123700.1	Wheat	cytosol	57.72	62.2
TraesCS3B01G309700.3	Wheat	plastid	63.13	62.13
EES19165	Sorghum	cytosol	57.11	62.09
TraesCS3D01G110300.2	Wheat	cytosol	56.91	61.74
HORVU3Hr1G070690.1	Barley	plasma membrane	62.93	61.69
HORVU1Hr1G028200.1	Barley	cytosol	57.11	61.56
TraesCS3D01G276000.3	Wheat	plastid	62.53	61.54
Zm00001d037689_P001	Maize	cytosol, extracellular	56.31	61.22
TraesCS3B01G127500.1	Wheat	cytosol	55.91	60.78
GSMUA_Achr8P27620_001	Banana	plastid	71.54	60.41
EES03543	Sorghum	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	60.92	60.32
Os01t0722700-01	Rice	plastid	35.27	59.86
Zm00001d043607_P001	Maize	plasma membrane	59.52	58.93
CDY37135	Canola	plastid	10.82	58.06
Os05t0532600-01	Rice	cytosol	15.63	57.78
HORVU1Hr1G075680.2	Barley	plastid	52.3	56.99
Zm00001d039512_P010	Maize	extracellular	56.31	55.86
HORVU3Hr1G068620.6	Barley	cytosol	60.92	55.47
EES00147	Sorghum	cytosol	56.51	54.76
Os07t0446800-00	Rice	plastid	54.31	54.42
GSMUA_Achr6P05500_001	Banana	plastid	54.11	53.36
CDY45062	Canola	plastid	50.3	51.43
CDY03607	Canola	plastid	50.1	51.23
CDY22797	Canola	plastid	50.7	50.8
CDY07303	Canola	plastid	50.3	50.4
CDY37134	Canola	endoplasmic reticulum, extracellular	42.48	50.0
CDY20557	Canola	extracellular, vacuole	13.03	50.0
CDY06724	Canola	plastid	49.7	49.9
CDY20902	Canola	plastid	49.5	49.8
CDY29586	Canola	cytosol	40.28	49.39
CDY68234	Canola	endoplasmic reticulum, extracellular, mitochondrion	40.88	48.92
CDY25373	Canola	plastid	49.3	48.71
CDY24565	Canola	plastid	48.7	48.12
TraesCS7A01G479500.1	Wheat	cytosol, endoplasmic reticulum	9.62	47.06
CDY34475	Canola	cytosol	14.63	45.62
CDX69335	Canola	plastid	38.68	41.24
CDX75678	Canola	plastid	38.48	41.03
CDX90402	Canola	cytosol, mitochondrion, plastid	39.88	40.61
CDY49677	Canola	cytosol, mitochondrion, plastid	39.68	40.24
Os01t0722800-00	Rice	cytosol, plasma membrane	0.0	0.0

Protein Annotations

KEGG:00010+2.7.1.1	KEGG:00051+2.7.1.1	KEGG:00052+2.7.1.1	KEGG:00500+2.7.1.1	KEGG:00520+2.7.1.1	KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1	MapMan:3.1.4.3	Gene3D:3.30.420.40	Gene3D:3.40.367.20	GO:A0A078EQ35	EnsemblPlants:CDY03331
ProteinID:CDY03331	ProteinID:CDY03331.1	GO:GO:0000166	GO:GO:0001678	GO:GO:0003674	GO:GO:0003824
GO:GO:0004396	GO:GO:0005488	GO:GO:0005524	GO:GO:0005536	GO:GO:0005575	GO:GO:0005623
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0016773	GO:GO:0019725	GO:GO:0030246	EnsemblPlantsGene:GSBRNA2T00115923001	InterPro:Hexokinase	InterPro:Hexokinase_C
InterPro:Hexokinase_N	InterPro:IPR001312	PFAM:PF00349	PFAM:PF03727	PRINTS:PR00475	PFscan:PS51748
PANTHER:PTHR19443	PANTHER:PTHR19443:SF52	SUPFAM:SSF53067	TMHMM:TMhelix	UniParc:UPI0004EAF964	SEG:seg

Description

BnaC09g10170D

Coordinates

chrLK031942:-:781806..785245

Molecular Weight (calculated)

54043.3 Da

IEP (calculated)

5.068

GRAVY (calculated)

0.046

Length

499 amino acids

Sequence
(BLAST)

001: MGKVAVGATV VCAAAVFAAT VYVVRRRMKS CGKWGRVIEI LKVFEEDCAT PIGKLRQVAD AMTVEMHAGL ASEGGSKLKM LISYVDNLPS GDEQGFFYAL
101: DLGGTNFRVM RVLLGGKQDR VVKQEFEEVS IPPPLMTGAS DELFNFIAEA LARFVATEGE DFHLPAGRQR ELGFTFSFPV KQTSLCSGTL ISWTKGFSIE
201: DALGQDVVGE LIKAMERVGL DMNVTALVND TVGTLAGGRY YNSDVVAAVI LGTGTNAAYV ERANAIPKWQ GLLPKSGEMV INMEWGNFRS SHLPLTEYDH
301: LLDFDSLNPG EQILEKIISG MYLGEILRRV LLKMAEEAAF FGDSIPPKLK VPFIIRTPTM SAMHSDTSPD LKVVGSKLKD ILEVPTTLKM RKVVISLCNI
401: IATRGARLSA AGIYGILKKL GRDAPKDGET TQKSVIAMDG GLFEHYTQFS ECMESSLKEL LGDEASESVE VIHSNDGSGV GAALLAASHS QYLEDSETS

Best Arabidopsis Sequence Match ( AT4G29130.1 )
(BLAST)

001: MGKVAVGATV VCTAAVCAVA VLVVRRRMQS SGKWGRVLAI LKAFEEDCAT PISKLRQVAD AMTVEMHAGL ASDGGSKLKM LISYVDNLPS GDEKGLFYAL
101: DLGGTNFRVM RVLLGGKQER VVKQEFEEVS IPPHLMTGGS DELFNFIAEA LAKFVATECE DFHLPEGRQR ELGFTFSFPV KQTSLSSGSL IKWTKGFSIE
201: EAVGQDVVGA LNKALERVGL DMRIAALVND TVGTLAGGRY YNPDVVAAVI LGTGTNAAYV ERATAIPKWH GLLPKSGEMV INMEWGNFRS SHLPLTEFDH
301: TLDFESLNPG EQILEKIISG MYLGEILRRV LLKMAEDAAF FGDTVPSKLR IPFIIRTPHM SAMHNDTSPD LKIVGSKIKD ILEVPTTSLK MRKVVISLCN
401: IIATRGARLS AAGIYGILKK LGRDTTKDEE VQKSVIAMDG GLFEHYTQFS ECMESSLKEL LGDEASGSVE VTHSNDGSGI GAALLAASHS LYLEDS

Arabidopsis Description

HXK1Phosphotransferase [Source:UniProtKB/TrEMBL;Acc:Q0WLE0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.