Factsheet for TraesCS3D01G276000.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS6A01G186300.1
TraesCS6B01G218100.1
TraesCS6D01G173400.1
TraesCS7A01G362000.1
TraesCS7B01G265500.1
TraesCS7D01G361000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G29130.1	TraesCS6A01G186300.1	AT1G76030.1	21798944
AT4G29130.1	TraesCS6B01G218100.1	AT1G76030.1	21798944
AT4G29130.1	TraesCS6D01G173400.1	AT1G76030.1	21798944
AT4G29130.1	TraesCS7A01G362000.1	AT1G76030.1	21798944
AT4G29130.1	TraesCS7B01G265500.1	AT1G76030.1	21798944
AT4G29130.1	TraesCS7D01G361000.1	AT1G76030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G309700.3	Wheat	plastid	98.42	98.42
TraesCS3A01G276100.1	Wheat	plastid	98.03	98.03
HORVU3Hr1G070690.1	Barley	plasma membrane	97.63	97.25
Os01t0742500-01	Rice	mitochondrion	87.18	87.35
Zm00001d043511_P001	Maize	mitochondrion	85.4	85.57
EES03587	Sorghum	plastid	85.01	85.18
TraesCS1D01G344600.1	Wheat	plastid	79.88	79.88
GSMUA_Achr3P16320_001	Banana	plastid	67.46	68.4
GSMUA_Achr6P26380_001	Banana	plastid	66.47	67.4
TraesCS1D01G355200.2	Wheat	plastid	65.29	67.14
GSMUA_Achr3P31700_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	64.89	66.73
VIT_11s0016g03070.t01	Wine grape	plastid	62.92	64.19
Bra039025.1-P	Field mustard	cytosol	63.12	64.0
CDY35895	Canola	plastid	62.92	63.8
CDX82746	Canola	cytosol	62.33	63.33
AT4G29130.1	Thale cress	plastid	61.93	63.31
KRH60208	Soybean	endoplasmic reticulum	62.13	63.25
Solyc12g008510.1.1	Tomato	plastid	62.13	63.13
KRH41490	Soybean	endoplasmic reticulum	61.93	63.05
PGSC0003DMT400000795	Potato	endoplasmic reticulum	61.74	62.73
CDY03331	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	61.54	62.53
Bra036699.1-P	Field mustard	plastid	61.14	62.12
CDY48733	Canola	plastid	61.14	62.12
KRH48988	Soybean	nucleus	60.95	62.05
KRH74246	Soybean	plastid	60.55	61.9
VIT_09s0002g03390.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	60.55	61.65
Solyc03g121070.2.1	Tomato	plastid	60.55	61.65
PGSC0003DMT400006474	Potato	mitochondrion	60.35	61.57
TraesCS3D01G110300.2	Wheat	cytosol	55.62	61.3
Solyc06g066440.2.1	Tomato	plastid	59.96	61.29
PGSC0003DMT400042598	Potato	plastid	59.76	61.09
TraesCS1D01G123700.1	Wheat	cytosol	55.62	60.91
KRH44270	Soybean	endoplasmic reticulum	58.58	60.37
TraesCS3D01G286000.1	Wheat	mitochondrion, plastid	58.78	60.2
AT2G19860.1	Thale cress	cytosol	59.57	60.16
KRH74248	Soybean	nucleus	58.58	59.88
GSMUA_Achr8P27620_001	Banana	plastid	63.71	54.65
KRH47202	Soybean	cytosol	41.62	52.1
TraesCS2D01G006600.1	Wheat	plastid	51.48	49.71
Bra031105.1-P	Field mustard	cytosol	12.62	48.48
TraesCS3D01G475600.1	Wheat	plastid	46.35	46.44
TraesCS1D01G237400.1	Wheat	plastid	41.81	42.4

Protein Annotations

KEGG:00010+2.7.1.1	KEGG:00051+2.7.1.1	KEGG:00052+2.7.1.1	KEGG:00500+2.7.1.1	KEGG:00520+2.7.1.1	KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1	MapMan:3.1.4.3	Gene3D:3.30.420.40	Gene3D:3.40.367.20	GO:GO:0000166	GO:GO:0001678
GO:GO:0003674	GO:GO:0003824	GO:GO:0004340	GO:GO:0004396	GO:GO:0005488	GO:GO:0005524
GO:GO:0005536	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009058	GO:GO:0009749	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0016773	GO:GO:0019725	GO:GO:0030246	InterPro:Hexokinase	InterPro:Hexokinase_BS	InterPro:Hexokinase_C
InterPro:Hexokinase_N	InterPro:IPR001312	PFAM:PF00349	PFAM:PF03727	PRINTS:PR00475	ScanProsite:PS00378
PFscan:PS51748	PANTHER:PTHR19443	PANTHER:PTHR19443:SF15	SUPFAM:SSF53067	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3D01G276000
EnsemblPlants:TraesCS3D01G276000.3	TIGR:cd00012	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3D:+:382746779..382752659

Molecular Weight (calculated)

54811.9 Da

IEP (calculated)

6.246

GRAVY (calculated)

-0.067

Length

507 amino acids

Sequence
(BLAST)

001: MAKGAVAGTA VVVCAAAAAA AAVGVAVVVS RRRRRTRDAE ASRRKKMADV IEELEQTLAT PTPLLRGIAD AMVEEMERGL RADPHAPLKM LISYVDNLPT
101: GDEHGLFYAL DLGGTNFRVL RVQLGGKEKR AVQQYEEVPI PPHLMVGTST ELFDFIAAEL ERFVETEGDD FHLPEGRHRE LGFTFSFPVH QTSISSGTLV
201: KWTKGFCING TVGEDVVAEL SSAMERQGLD MKVTALVNDT VGTLAGGIYA DNDVVAAVIL GTGTNAAYVE HVDAIPKWKG PLPRSGNMVI NMEWGNFKSD
301: KLPRSDYDIA LDFESLNPGE QMYEKMISGM YLGEVVRRIL LRLAHDASLF GDVVPSKLEK LFVLRTPDMS AMHHDTSHDL KHLGAKLKDI LGVADTSLEA
401: RYITLHVCDK VAERGARLAA AGIYGIVKKL GRDRAPTDGS PKQRTVVAID GGLYEHYKKF SSRVEATVAE LLGEAAASSV VVKMANDGSG IGAALLAASH
501: SQYNVVE

Best Arabidopsis Sequence Match ( AT1G47840.1 )
(BLAST)

001: MSLMFSSPVV TPALGSFTFS SRPRSNYIVM SAVRSNSAST CPILTKFQKD CATPTPYLRN VANAIADDMR DGLAVEGGGD LEMILTFVDA LPSGNEEGLF
101: YALDLGGTNF RVRSVQLGGK KERVLATESE QISISQKLMI GTSEELFGFI ASKLANFVAK EKPGRFLLEE GRKRELGFTF SFPVKQTSID SGTLSKWTKG
201: FKVSGMEGKN VVACLNEAME AHGLDMRVSA LVNDGVGTLA GARYWDEDVM VGVILGTGTN ACYVEQKHAI PKLRSKSSSG TTIINTEWGG FSKILPQTIF
301: DLEMDETSLN PGEHLYEKMI SGMYLGEIVR RVLLHMCETS DLFGHFAPAK LSTPLALRTE HLCKMQEDNT DDLRDVGSIL YDFLDVEANM NARRRVVEVC
401: DTVVKRGGRL AGAGIVAILE KIEKDTKRMG SGKRTVVAMD GALYEKYPQY RQYMQDALVE LLGHKLASHV AIKHTKDVSG LGAALLAATN SIY

Arabidopsis Description

HXK3Hexokinase-like 1 protein [Source:UniProtKB/Swiss-Prot;Acc:Q9FZG4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.