Factsheet for TraesCS3D01G475600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G137900.1
TraesCS4B01G148100.1
TraesCS4D01G153300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G50460.1	TraesCS4A01G137900.1	AT4G26630.1	25387881
AT1G50460.1	TraesCS4B01G148100.1	AT4G26630.1	25387881
AT1G50460.1	TraesCS4D01G153300.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G525400.2	Wheat	plastid	97.43	97.43
TraesCS3A01G480900.1	Wheat	plastid	97.04	96.84
HORVU3Hr1G105380.4	Barley	cytosol	84.19	88.75
Os01t0940100-01	Rice	mitochondrion	59.49	84.31
Zm00001d042146_P002	Maize	mitochondrion, plastid	80.04	81.49
Zm00001d011889_P001	Maize	mitochondrion	79.25	80.68
OQU88184	Sorghum	mitochondrion, plastid	79.45	68.37
GSMUA_Achr1P11390_001	Banana	plastid	67.79	68.06
GSMUA_Achr11P...	Banana	endoplasmic reticulum	63.04	64.19
GSMUA_AchrUn_...	Banana	cytosol	51.78	64.06
GSMUA_Achr8P29510_001	Banana	endoplasmic reticulum, mitochondrion	65.02	64.01
KRH24099	Soybean	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	62.65	62.9
KRH29072	Soybean	plastid	62.45	62.7
VIT_06s0061g00040.t01	Wine grape	plastid	64.43	62.33
TraesCS1D01G237400.1	Wheat	plastid	61.46	62.2
KRH77671	Soybean	plastid	61.07	62.05
KRH27814	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	60.47	61.45
CDY37135	Canola	plastid	11.26	61.29
Solyc11g065220.1.1	Tomato	endoplasmic reticulum	61.46	60.86
PGSC0003DMT400034299	Potato	endoplasmic reticulum	61.46	60.74
CDY34475	Canola	cytosol	18.97	60.0
CDY22797	Canola	plastid	57.51	58.43
Bra030490.1-P	Field mustard	plastid	56.72	57.63
Bra018850.1-P	Field mustard	plastid	56.72	57.63
AT1G50460.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	56.52	57.43
CDY07303	Canola	plastid	56.52	57.43
CDY03607	Canola	plastid	54.55	56.56
Bra014254.1-P	Field mustard	plastid	55.73	56.51
CDY45062	Canola	plastid	54.35	56.35
CDY20557	Canola	extracellular, vacuole	14.43	56.15
CDY37134	Canola	endoplasmic reticulum, extracellular	47.04	56.13
CDY29586	Canola	cytosol	45.06	56.02
CDY68234	Canola	endoplasmic reticulum, extracellular, mitochondrion	46.05	55.88
Bra035821.1-P	Field mustard	plastid	55.73	55.84
CDY25373	Canola	plastid	55.53	55.64
CDY24565	Canola	plastid	55.34	55.45
AT3G20040.1	Thale cress	plastid	54.74	55.18
TraesCS1D01G355200.2	Wheat	plastid	51.78	53.14
TraesCS1D01G123700.1	Wheat	cytosol	45.26	49.46
TraesCS3D01G110300.2	Wheat	cytosol	44.86	49.35
TraesCS3D01G286000.1	Wheat	mitochondrion, plastid	47.63	48.69
TraesCS3D01G276000.3	Wheat	plastid	46.44	46.35
TraesCS1D01G344600.1	Wheat	plastid	45.85	45.76
TraesCS2D01G006600.1	Wheat	plastid	42.89	41.33
CDX81950	Canola	mitochondrion	6.92	37.23

Protein Annotations

KEGG:00010+2.7.1.1	KEGG:00051+2.7.1.1	KEGG:00052+2.7.1.1	KEGG:00500+2.7.1.1	KEGG:00520+2.7.1.1	KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1	MapMan:3.1.4.3	Gene3D:3.30.420.40	Gene3D:3.40.367.20	GO:GO:0000166	GO:GO:0001678
GO:GO:0003674	GO:GO:0003824	GO:GO:0004396	GO:GO:0005488	GO:GO:0005524	GO:GO:0005536
GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0016773
GO:GO:0019725	GO:GO:0030246	InterPro:Hexokinase	InterPro:Hexokinase_BS	InterPro:Hexokinase_C	InterPro:Hexokinase_N
InterPro:IPR001312	PFAM:PF00349	PFAM:PF03727	PRINTS:PR00475	ScanProsite:PS00378	PFscan:PS51748
PANTHER:PTHR19443	PANTHER:PTHR19443:SF6	SUPFAM:SSF53067	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3D01G475600	EnsemblPlants:TraesCS3D01G475600.1
TIGR:cd00012	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:576563836..576570414

Molecular Weight (calculated)

54354.3 Da

IEP (calculated)

5.250

GRAVY (calculated)

0.001

Length

506 amino acids

Sequence
(BLAST)

001: MGKAGFGVAA GCAAVTCAIA AVMVAQRVAA RARWRRAVAL LREFEEGCAT PPARLRQVVD AMVVEMHAGL ASDGGSKLKM LLTLVDALPN GDEEGVCYAI
101: DLGGMDFRVL RVEIDVGSTA VINQRVETHA IPEELMGTSQ DLFNFVALTL KNFVEREDGK DAQKPLGFTF SFPVRQNSVS SGSLIRWTKG FSVGDTVGKD
201: VSQCLDEALA RCGSNMRVTA LVNDTVGTLA LGHYYYKDTV AAVIIGAGTN ACYIERIDAI IKSQGLPTNS GGMVVNMEWG NFWSSHLPRT PYDISLDDET
301: QNRNDQGFEK MISGIYLGEI ARLVLQRMAQ ESDIFGDGAE SLSTPFILST PYLAAICEDD SQDLSEVRRI LQEHLKIPNA PLKTRRLVVK ICDIVTHRAA
401: RLAAAGIVGI LKKLGRDGSA SAASSSGRMR EQPKETVVAI EGSLYQEYPV FKEYLDEALV EILGEEVART VTLRVMVDGP GTGAALMAAV HSSNRQQQGG
501: GGGGTI

Best Arabidopsis Sequence Match ( AT1G50460.1 )
(BLAST)

001: MGKVAVAFAA VAVVAACSVA AVMVGRRMKS RRKWRTVVEI LKELEDDCDT PVGRLRQVVD AMAVEMHAGL ASEGGSKLKM LLTFVDDLPT GREKGTYYAL
101: HLGGTYFRIL RVLLGDQRSY LDVQDVERHP IPSHLMNSTS EVLFNFLAFS LERFIEKEEN GSDSQGVRRE LAFTFSFPVK HTSISSGVLI KWTKGFEISE
201: MVGQDIAECL QGALNRRGLD MHVAALVNDT VGALSLGYYH DPDTVVAVVF GTGSNACYLE RTDAIIKCQG LLTTSGSMVV NMEWGNFWSS HLPRTSYDID
301: LDAESSNAND MGFEKMISGM YLGDIVRRVI LRMSEDSDIF GPISPVLSEP YVLRTNSVSA IHEDDTPELQ EVARILKDIG VSDVPLKVRK LVVKICDVVT
401: RRAGRLAAAG IAGILKKIGR DGSGGITSGR SRSEIQMQKR TVVAVEGGLY MNYTMFREYM EEALVEILGE EVSQYVVVKA MEDGSSIGSA LLVASLQS

Arabidopsis Description

HKL1Hexokinase-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS1]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.