Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS4A01G137900.1 | |
| TraesCS4B01G148100.1 | |
| TraesCS4D01G153300.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G50460.1 | TraesCS4A01G137900.1 | AT4G26630.1 | 25387881 |
| AT1G50460.1 | TraesCS4B01G148100.1 | AT4G26630.1 | 25387881 |
| AT1G50460.1 | TraesCS4D01G153300.1 | AT4G26630.1 | 25387881 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G475600.1 | Wheat | plastid | 96.84 | 97.04 |
| TraesCS3B01G525400.2 | Wheat | plastid | 96.45 | 96.64 |
| HORVU3Hr1G105380.4 | Barley | cytosol | 84.42 | 89.17 |
| Os01t0940100-01 | Rice | mitochondrion | 59.76 | 84.87 |
| Zm00001d042146_P002 | Maize | mitochondrion, plastid | 80.87 | 82.5 |
| Zm00001d011889_P001 | Maize | mitochondrion | 80.28 | 81.89 |
| OQU88184 | Sorghum | mitochondrion, plastid | 80.87 | 69.73 |
| GSMUA_Achr1P11390_001 | Banana | plastid | 68.84 | 69.25 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 63.91 | 65.19 |
| GSMUA_Achr8P29510_001 | Banana | endoplasmic reticulum, mitochondrion | 66.08 | 65.18 |
| GSMUA_AchrUn_... | Banana | cytosol | 52.27 | 64.79 |
| VIT_06s0061g00040.t01 | Wine grape | plastid | 65.88 | 63.86 |
| KRH29072 | Soybean | plastid | 63.31 | 63.69 |
| TraesCS1A01G234700.1 | Wheat | mitochondrion, plastid | 61.74 | 63.23 |
| KRH24099 | Soybean | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 62.72 | 63.1 |
| KRH77671 | Soybean | plastid | 61.93 | 63.05 |
| KRH27814 | Soybean | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 61.34 | 62.45 |
| CDY37135 | Canola | plastid | 11.44 | 62.37 |
| Solyc11g065220.1.1 | Tomato | endoplasmic reticulum | 61.74 | 61.25 |
| PGSC0003DMT400034299 | Potato | endoplasmic reticulum | 61.74 | 61.13 |
| CDY34475 | Canola | cytosol | 18.93 | 60.0 |
| CDY22797 | Canola | plastid | 58.38 | 59.44 |
| AT1G50460.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 57.79 | 58.84 |
| Bra030490.1-P | Field mustard | plastid | 57.59 | 58.63 |
| Bra018850.1-P | Field mustard | plastid | 57.59 | 58.63 |
| CDY07303 | Canola | plastid | 57.4 | 58.43 |
| CDY03607 | Canola | plastid | 55.82 | 57.99 |
| Bra014254.1-P | Field mustard | plastid | 57.0 | 57.92 |
| CDY45062 | Canola | plastid | 55.62 | 57.79 |
| CDY37134 | Canola | endoplasmic reticulum, extracellular | 47.73 | 57.08 |
| CDY29586 | Canola | cytosol | 45.76 | 57.0 |
| CDY20557 | Canola | extracellular, vacuole | 14.6 | 56.92 |
| CDY68234 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 46.55 | 56.59 |
| Bra035821.1-P | Field mustard | plastid | 56.02 | 56.24 |
| CDY25373 | Canola | plastid | 55.82 | 56.04 |
| AT3G20040.1 | Thale cress | plastid | 55.42 | 55.98 |
| CDY24565 | Canola | plastid | 55.62 | 55.84 |
| TraesCS1A01G355200.1 | Wheat | golgi | 52.07 | 53.55 |
| TraesCS1A01G122800.1 | Wheat | cytosol | 45.56 | 49.89 |
| TraesCS3A01G286200.1 | Wheat | mitochondrion, plastid | 48.13 | 49.29 |
| TraesCS3A01G108500.2 | Wheat | cytosol | 44.58 | 49.13 |
| TraesCS3A01G276100.1 | Wheat | plastid | 47.34 | 47.34 |
| TraesCS1A01G342500.1 | Wheat | plastid | 46.15 | 46.15 |
| TraesCS2A01G005200.1 | Wheat | mitochondrion | 43.59 | 44.29 |
| CDX81950 | Canola | mitochondrion | 7.1 | 38.3 |
| TraesCS7A01G479500.1 | Wheat | cytosol, endoplasmic reticulum | 6.11 | 30.39 |
Protein Annotations
| KEGG:00010+2.7.1.1 | KEGG:00051+2.7.1.1 | KEGG:00052+2.7.1.1 | KEGG:00500+2.7.1.1 | KEGG:00520+2.7.1.1 | KEGG:00521+2.7.1.1 |
| KEGG:00524+2.7.1.1 | MapMan:3.1.4.3 | Gene3D:3.30.420.40 | Gene3D:3.40.367.20 | GO:GO:0000166 | GO:GO:0001678 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004396 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005536 |
| GO:GO:0005975 | GO:GO:0006091 | GO:GO:0006096 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0016773 |
| GO:GO:0019725 | GO:GO:0030246 | InterPro:Hexokinase | InterPro:Hexokinase_BS | InterPro:Hexokinase_C | InterPro:Hexokinase_N |
| InterPro:IPR001312 | PFAM:PF00349 | PFAM:PF03727 | PRINTS:PR00475 | ScanProsite:PS00378 | PFscan:PS51748 |
| PANTHER:PTHR19443 | PANTHER:PTHR19443:SF6 | SUPFAM:SSF53067 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3A01G480900 | EnsemblPlants:TraesCS3A01G480900.1 |
| TIGR:cd00012 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:712127525..712134131
Molecular Weight (calculated)
54570.4 Da
IEP (calculated)
5.548
GRAVY (calculated)
-0.018
Length
507 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKAGFGVAA GCAAVTCAIA AVMVAQRVAA RARWRRAVAL LREFEEGCAT PPARLRQVVD AMVVEMHAGL ASDGGSKLKM LLTFVDALPN GDEEGVYYAI
101: DLGGTDFRVL RVEIDAGSTT VINQRVETHA ISEELMGTSQ DLFNFVALTL KNFVEREDGK DAQKPLGFTF SFPVRQNSVS SGSLIRWTKG FSVGDTVGKD
201: VSQCLDEALA RCGSNMRVTA LVNDTVGTLA LGHYYYKDTV AAVIIGAGTN ACYIERTDAI IKCQGLLTNS GGMVVNMEWG NFWSSHLPRT AYDISLDDET
301: QNRNDQGFEK MISGIYLGEI ARLVLQRMAQ ESDIFGDGAE SLSTPFILST PYLAAICEDD SQDLSEVRRI LQEHLKIPNA PLKTRRLVVK ICDIVTHRAA
401: RLAAAGIVGI LKKLGRDGSA SAASSSGRMR EQPKKTVVAI EGSLYQEYPV FKEYLDEALV EILGEEVAQT VTLRVMVDGP GTGAALLAAV HSSNRQQQQG
501: GRGGGSI
101: DLGGTDFRVL RVEIDAGSTT VINQRVETHA ISEELMGTSQ DLFNFVALTL KNFVEREDGK DAQKPLGFTF SFPVRQNSVS SGSLIRWTKG FSVGDTVGKD
201: VSQCLDEALA RCGSNMRVTA LVNDTVGTLA LGHYYYKDTV AAVIIGAGTN ACYIERTDAI IKCQGLLTNS GGMVVNMEWG NFWSSHLPRT AYDISLDDET
301: QNRNDQGFEK MISGIYLGEI ARLVLQRMAQ ESDIFGDGAE SLSTPFILST PYLAAICEDD SQDLSEVRRI LQEHLKIPNA PLKTRRLVVK ICDIVTHRAA
401: RLAAAGIVGI LKKLGRDGSA SAASSSGRMR EQPKKTVVAI EGSLYQEYPV FKEYLDEALV EILGEEVAQT VTLRVMVDGP GTGAALLAAV HSSNRQQQQG
501: GRGGGSI
001: MGKVAVAFAA VAVVAACSVA AVMVGRRMKS RRKWRTVVEI LKELEDDCDT PVGRLRQVVD AMAVEMHAGL ASEGGSKLKM LLTFVDDLPT GREKGTYYAL
101: HLGGTYFRIL RVLLGDQRSY LDVQDVERHP IPSHLMNSTS EVLFNFLAFS LERFIEKEEN GSDSQGVRRE LAFTFSFPVK HTSISSGVLI KWTKGFEISE
201: MVGQDIAECL QGALNRRGLD MHVAALVNDT VGALSLGYYH DPDTVVAVVF GTGSNACYLE RTDAIIKCQG LLTTSGSMVV NMEWGNFWSS HLPRTSYDID
301: LDAESSNAND MGFEKMISGM YLGDIVRRVI LRMSEDSDIF GPISPVLSEP YVLRTNSVSA IHEDDTPELQ EVARILKDIG VSDVPLKVRK LVVKICDVVT
401: RRAGRLAAAG IAGILKKIGR DGSGGITSGR SRSEIQMQKR TVVAVEGGLY MNYTMFREYM EEALVEILGE EVSQYVVVKA MEDGSSIGSA LLVASLQS
101: HLGGTYFRIL RVLLGDQRSY LDVQDVERHP IPSHLMNSTS EVLFNFLAFS LERFIEKEEN GSDSQGVRRE LAFTFSFPVK HTSISSGVLI KWTKGFEISE
201: MVGQDIAECL QGALNRRGLD MHVAALVNDT VGALSLGYYH DPDTVVAVVF GTGSNACYLE RTDAIIKCQG LLTTSGSMVV NMEWGNFWSS HLPRTSYDID
301: LDAESSNAND MGFEKMISGM YLGDIVRRVI LRMSEDSDIF GPISPVLSEP YVLRTNSVSA IHEDDTPELQ EVARILKDIG VSDVPLKVRK LVVKICDVVT
401: RRAGRLAAAG IAGILKKIGR DGSGGITSGR SRSEIQMQKR TVVAVEGGLY MNYTMFREYM EEALVEILGE EVSQYVVVKA MEDGSSIGSA LLVASLQS
Arabidopsis Description
HKL1Hexokinase-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS1]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.