Factsheet for Bra018850.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra010432.1-P
Bra026415.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G50460.1	Bra010432.1-P	AT4G26630.1	25387881
AT1G50460.1	Bra026415.1-P	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22797	Canola	plastid	97.39	97.39
CDY37135	Canola	plastid	18.07	96.77
CDY37134	Canola	endoplasmic reticulum, extracellular	80.72	94.81
AT1G50460.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	92.77	92.77
Bra030490.1-P	Field mustard	plastid	92.37	92.37
Bra014254.1-P	Field mustard	plastid	92.17	91.98
Bra035821.1-P	Field mustard	plastid	78.31	77.23
KRH27814	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	70.68	70.68
KRH77671	Soybean	plastid	70.28	70.28
KRH29072	Soybean	plastid	69.88	69.05
KRH24099	Soybean	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	69.08	68.25
VIT_06s0061g00040.t01	Wine grape	plastid	70.28	66.92
PGSC0003DMT400034299	Potato	endoplasmic reticulum	68.07	66.21
Solyc11g065220.1.1	Tomato	endoplasmic reticulum	67.27	65.56
GSMUA_Achr8P29510_001	Banana	endoplasmic reticulum, mitochondrion	63.86	61.87
GSMUA_Achr1P11390_001	Banana	plastid	62.45	61.71
Os01t0940100-01	Rice	mitochondrion	43.98	61.34
GSMUA_AchrUn_...	Banana	cytosol	49.8	60.64
Zm00001d042146_P002	Maize	mitochondrion, plastid	59.64	59.76
GSMUA_Achr11P...	Banana	endoplasmic reticulum	59.64	59.76
Zm00001d011889_P001	Maize	mitochondrion	58.84	58.95
TraesCS3A01G480900.1	Wheat	plastid	58.63	57.59
TraesCS3B01G525400.2	Wheat	plastid	58.03	57.11
TraesCS3D01G475600.1	Wheat	plastid	57.63	56.72
HORVU3Hr1G105380.4	Barley	cytosol	53.61	55.62
Os05t0375100-00	Rice	mitochondrion	53.01	52.38
Bra039025.1-P	Field mustard	cytosol	52.21	52.0
Bra036699.1-P	Field mustard	plastid	51.41	51.3
OQU77891	Sorghum	plastid	51.41	51.1
OQU88184	Sorghum	mitochondrion, plastid	59.84	50.68
HORVU1Hr1G057760.1	Barley	plastid	50.8	50.6
Zm00001d037861_P001	Maize	plastid	51.0	50.5
TraesCS1A01G234700.1	Wheat	mitochondrion, plastid	49.6	49.9
TraesCS1B01G248900.1	Wheat	mitochondrion, plastid	49.8	49.6
TraesCS1D01G237400.1	Wheat	plastid	49.6	49.4
Bra015599.1-P	Field mustard	plastid	43.98	44.06
Bra031105.1-P	Field mustard	cytosol	10.44	39.39
Bra011789.1-P	Field mustard	mitochondrion	33.53	35.84
Bra010616.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	34.54	34.89

Protein Annotations

KEGG:00010+2.7.1.1	KEGG:00051+2.7.1.1	KEGG:00052+2.7.1.1	KEGG:00500+2.7.1.1	KEGG:00520+2.7.1.1	KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1	MapMan:3.1.4.3	Gene3D:3.30.420.40	Gene3D:3.40.367.20	EnsemblPlantsGene:Bra018850	EnsemblPlants:Bra018850.1
EnsemblPlants:Bra018850.1-P	GO:GO:0000166	GO:GO:0001678	GO:GO:0003674	GO:GO:0003824	GO:GO:0004396
GO:GO:0005488	GO:GO:0005524	GO:GO:0005536	GO:GO:0005575	GO:GO:0005623	GO:GO:0005975
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016773
GO:GO:0019725	GO:GO:0030246	GO:GO:0046835	InterPro:Hexokinase	InterPro:Hexokinase_C	InterPro:Hexokinase_N
InterPro:IPR001312	UniProt:M4DQQ7	PFAM:PF00349	PFAM:PF03727	PRINTS:PR00475	PFscan:PS51257
PFscan:PS51748	PANTHER:PTHR19443	PANTHER:PTHR19443:SF6	SUPFAM:SSF53067	TMHMM:TMhelix	UniParc:UPI000253EAEF
SEG:seg	:	:	:	:	:

Description

AT1G50460 (E=2e-210) HKL1 | HKL1 (HEXOKINASE-LIKE 1); ATP binding / fructokinase/ glucokinase/ hexokinase

Coordinates

chrA06:-:1610305..1613371

Molecular Weight (calculated)

54498.0 Da

IEP (calculated)

6.684

GRAVY (calculated)

0.021

Length

498 amino acids

Sequence
(BLAST)

001: MGKVAVAFAA AAVVAACSVA AVMVRRRVKS RRKWRTVVEI LKELEEGCDT PVGRLRQVVD AMAVEMHAGL ASEGGSKLKM LLTFVHELPK GTEKGTYYAL
101: HLGGTYFRIL RVLLGGERSY LDVQDVERHP IPSHLMNSTS EVLFNFLAFS LERFIEKEGD GSSSQGVKRE LAFTFSFPVK HSSISSGVLI KWTKGFEISE
201: MVGKDIAECL QVALNRRGLD MHVAVLVNDT VGALSLGYYH DPDTVVAVVF GTGSNACYLE RTDAMIKSQG LLTTSGSMVV NMEWGNFWSS HLPRTSYDID
301: LDAESSNSNE MGFEKMLSGM YLGDIVRRVI LRMSQESDIF GPSSSLLSEP YALRTNSVSA MHEDDTPELQ EVTRILKDLG VSEVPLKVRK LVVKVCDVVT
401: RRAGRLAAAG IAGILKKIGR DGSGGITSGR SRSEIQMQKR TVVAVEGGLY MNYSMFREYM EEALVEILGE EVSQYVVVKA MEDGSSIGSA LLVASLQS

Best Arabidopsis Sequence Match ( AT1G50460.1 )
(BLAST)

001: MGKVAVAFAA VAVVAACSVA AVMVGRRMKS RRKWRTVVEI LKELEDDCDT PVGRLRQVVD AMAVEMHAGL ASEGGSKLKM LLTFVDDLPT GREKGTYYAL
101: HLGGTYFRIL RVLLGDQRSY LDVQDVERHP IPSHLMNSTS EVLFNFLAFS LERFIEKEEN GSDSQGVRRE LAFTFSFPVK HTSISSGVLI KWTKGFEISE
201: MVGQDIAECL QGALNRRGLD MHVAALVNDT VGALSLGYYH DPDTVVAVVF GTGSNACYLE RTDAIIKCQG LLTTSGSMVV NMEWGNFWSS HLPRTSYDID
301: LDAESSNAND MGFEKMISGM YLGDIVRRVI LRMSEDSDIF GPISPVLSEP YVLRTNSVSA IHEDDTPELQ EVARILKDIG VSDVPLKVRK LVVKICDVVT
401: RRAGRLAAAG IAGILKKIGR DGSGGITSGR SRSEIQMQKR TVVAVEGGLY MNYTMFREYM EEALVEILGE EVSQYVVVKA MEDGSSIGSA LLVASLQS

Arabidopsis Description

HKL1Hexokinase-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS1]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.