Factsheet for PGSC0003DMT400034299

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 3
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400037344
PGSC0003DMT400057390

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G50460.1	PGSC0003DMT400037344	AT4G26630.1	25387881
AT1G50460.1	PGSC0003DMT400057390	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g065220.1.1	Tomato	endoplasmic reticulum	98.24	98.43
KRH29072	Soybean	plastid	75.59	76.79
KRH24099	Soybean	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	75.2	76.39
KRH77671	Soybean	plastid	73.05	75.1
KRH27814	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	72.66	74.7
VIT_06s0061g00040.t01	Wine grape	plastid	74.61	73.04
CDY37134	Canola	endoplasmic reticulum, extracellular	58.01	70.05
CDY22797	Canola	plastid	67.58	69.48
AT1G50460.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	67.38	69.28
CDY29586	Canola	cytosol	54.69	68.8
CDY03607	Canola	plastid	65.43	68.65
Bra014254.1-P	Field mustard	plastid	66.6	68.34
CDY68234	Canola	endoplasmic reticulum, extracellular, mitochondrion	55.47	68.11
Bra030490.1-P	Field mustard	plastid	66.21	68.07
Bra018850.1-P	Field mustard	plastid	66.21	68.07
CDY45062	Canola	plastid	64.84	68.03
Os01t0940100-01	Rice	mitochondrion	47.27	67.79
CDY07303	Canola	plastid	65.82	67.67
GSMUA_Achr1P11390_001	Banana	plastid	66.6	67.66
GSMUA_Achr8P29510_001	Banana	endoplasmic reticulum, mitochondrion	66.6	66.34
GSMUA_AchrUn_...	Banana	cytosol	52.93	66.26
GSMUA_Achr11P...	Banana	endoplasmic reticulum	63.87	65.79
CDY24565	Canola	plastid	64.84	65.74
Bra035821.1-P	Field mustard	plastid	64.84	65.74
CDY37135	Canola	plastid	11.91	65.59
Zm00001d011889_P001	Maize	mitochondrion	63.48	65.39
CDY25373	Canola	plastid	64.45	65.35
Zm00001d042146_P002	Maize	mitochondrion, plastid	63.28	65.19
AT3G20040.1	Thale cress	plastid	63.87	65.14
CDY20557	Canola	extracellular, vacuole	16.21	63.85
TraesCS3A01G480900.1	Wheat	plastid	61.13	61.74
TraesCS3B01G525400.2	Wheat	plastid	60.94	61.66
TraesCS3D01G475600.1	Wheat	plastid	60.74	61.46
HORVU3Hr1G105380.4	Barley	cytosol	56.64	60.42
Os05t0375100-00	Rice	mitochondrion	57.42	58.33
TraesCS1A01G234700.1	Wheat	mitochondrion, plastid	56.25	58.18
TraesCS1D01G237400.1	Wheat	plastid	56.25	57.6
TraesCS1B01G248900.1	Wheat	mitochondrion, plastid	56.05	57.4
HORVU1Hr1G057760.1	Barley	plastid	56.05	57.4
PGSC0003DMT400000795	Potato	endoplasmic reticulum	55.47	56.91
OQU77891	Sorghum	plastid	55.47	56.69
OQU88184	Sorghum	mitochondrion, plastid	63.67	55.44
Zm00001d037861_P001	Maize	plastid	54.1	55.07
PGSC0003DMT400006474	Potato	mitochondrion	52.73	54.33
PGSC0003DMT400042598	Potato	plastid	50.59	52.22
PGSC0003DMT400025526	Potato	plastid	48.63	46.72
PGSC0003DMT400078702	Potato	plastid	35.55	37.07

Protein Annotations

KEGG:00010+2.7.1.1	KEGG:00051+2.7.1.1	KEGG:00052+2.7.1.1	KEGG:00500+2.7.1.1	KEGG:00520+2.7.1.1	KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1	EntrezGene:102580689	MapMan:3.1.4.3	Gene3D:3.30.420.40	Gene3D:3.40.367.20	GO:GO:0000166
GO:GO:0001678	GO:GO:0003674	GO:GO:0003824	GO:GO:0004396	GO:GO:0005488	GO:GO:0005524
GO:GO:0005536	GO:GO:0005575	GO:GO:0005623	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016773
GO:GO:0019725	GO:GO:0030246	GO:GO:0046835	InterPro:Hexokinase	InterPro:Hexokinase_BS	InterPro:Hexokinase_C
InterPro:Hexokinase_N	InterPro:IPR001312	UniProt:M1B0G1	PFAM:PF00349	PFAM:PF03727	EnsemblPlantsGene:PGSC0003DMG400013187
PGSC:PGSC0003DMG400013187	EnsemblPlants:PGSC0003DMT400034299	PRINTS:PR00475	ScanProsite:PS00378	PFscan:PS51257	PFscan:PS51748
PANTHER:PTHR19443	PANTHER:PTHR19443:SF6	SUPFAM:SSF53067	TMHMM:TMhelix	UniParc:UPI00029612E0	RefSeq:XP_006362320.1
SEG:seg	:	:	:	:	:

Description

Hexokinase 6 [Source:PGSC_GENE;Acc:PGSC0003DMG400013187]

Coordinates

chr11:+:36684932..36690395

Molecular Weight (calculated)

55626.3 Da

IEP (calculated)

5.808

GRAVY (calculated)

-0.025

Length

512 amino acids

Sequence
(BLAST)

001: MGRLGVGLAV GCAMAACIVA AAMVGKRVSK RRKWLKMVKV LEELEESCDT TVFRLKQVVD AMAVEMHAGL ASEGGSKLKM LLTYVDKLPN GSEEGTYYAL
101: DLGGTNFRVL RVHLGDQRSA ILGQDIERQP IPQHLMTSTS EDLFDFIASS LKDFIEKEGN DLEQTSPRRR ELGFTFSFPV KQSSVSSGIL MKWTKGFAIE
201: DTIGRDVSEC LQLALSRKGL DVRVAALIND TVGTLALGHY NDEDTVAAVI IGTGTNACYL ERADAIIKCQ GLLTTSGSMV VNMEWGNFWS SHLPRTSYDI
301: DLDVASPNPN DQGFEKMISG MYLGDIVRRV LLRMSKQSDD FGPSSSKLAI PFVLRTPLMA AMHEDDSPDL SEVAKILEEV LELPDVPVKV RKLVVKVCDV
401: ITRRAARLAA AGIVGILKKI GRDGSGGIAS GKFRSNRPSR MRRTVVAIEG GLYTSYTTFR EYLNEAMAEI LGEEVSPYVV LRVMEDGSGT GAALVAAANS
501: PPEAAADTVQ LQ

Best Arabidopsis Sequence Match ( AT1G50460.1 )
(BLAST)

001: MGKVAVAFAA VAVVAACSVA AVMVGRRMKS RRKWRTVVEI LKELEDDCDT PVGRLRQVVD AMAVEMHAGL ASEGGSKLKM LLTFVDDLPT GREKGTYYAL
101: HLGGTYFRIL RVLLGDQRSY LDVQDVERHP IPSHLMNSTS EVLFNFLAFS LERFIEKEEN GSDSQGVRRE LAFTFSFPVK HTSISSGVLI KWTKGFEISE
201: MVGQDIAECL QGALNRRGLD MHVAALVNDT VGALSLGYYH DPDTVVAVVF GTGSNACYLE RTDAIIKCQG LLTTSGSMVV NMEWGNFWSS HLPRTSYDID
301: LDAESSNAND MGFEKMISGM YLGDIVRRVI LRMSEDSDIF GPISPVLSEP YVLRTNSVSA IHEDDTPELQ EVARILKDIG VSDVPLKVRK LVVKICDVVT
401: RRAGRLAAAG IAGILKKIGR DGSGGITSGR SRSEIQMQKR TVVAVEGGLY MNYTMFREYM EEALVEILGE EVSQYVVVKA MEDGSSIGSA LLVASLQS

Arabidopsis Description

HKL1Hexokinase-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS1]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.