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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • cytosol 3
  • plastid 5
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

locusBlocations
KXG20226

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G29130.1 KXG20226 AT1G76030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d043511_P001 Maize mitochondrion 97.04 97.04
Os01t0742500-01 Rice mitochondrion 90.71 90.71
TraesCS3D01G276000.3 Wheat plastid 85.18 85.01
TraesCS3B01G309700.3 Wheat plastid 85.18 85.01
TraesCS3A01G276100.1 Wheat plastid 85.18 85.01
HORVU3Hr1G070690.1 Barley plasma membrane 84.98 84.48
EES18534 Sorghum endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole 84.19 84.02
GSMUA_Achr3P16320_001 Banana plastid 69.57 70.4
GSMUA_Achr6P26380_001 Banana plastid 68.77 69.6
GSMUA_Achr3P31700_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 67.0 68.76
VIT_11s0016g03070.t01 Wine grape plastid 67.39 68.61
AT4G29130.1 Thale cress plastid 65.22 66.53
KRH60208 Soybean endoplasmic reticulum 65.42 66.47
Bra039025.1-P Field mustard cytosol 65.61 66.4
CDY35895 Canola plastid 65.42 66.2
CDX82746 Canola cytosol 65.02 65.93
KRH41490 Soybean endoplasmic reticulum 64.82 65.86
PGSC0003DMT400000795 Potato endoplasmic reticulum 64.82 65.73
CDY03331 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 64.82 65.73
CDY48733 Canola plastid 64.62 65.53
Bra036699.1-P Field mustard plastid 64.43 65.33
Solyc12g008510.1.1 Tomato plastid 63.83 64.73
Solyc06g066440.2.1 Tomato plastid 63.44 64.72
AT2G19860.1 Thale cress cytosol 64.03 64.54
KRH74246 Soybean plastid 63.24 64.52
Solyc03g121070.2.1 Tomato plastid 63.44 64.46
PGSC0003DMT400006474 Potato mitochondrion 63.24 64.39
PGSC0003DMT400042598 Potato plastid 63.04 64.31
VIT_09s0002g03390.t01 Wine grape cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 63.24 64.26
KRH48988 Soybean nucleus 63.04 64.06
EES19165 Sorghum cytosol 57.71 63.62
KRH74248 Soybean nucleus 60.87 62.1
EES03543 Sorghum endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 61.66 61.9
KRH44270 Soybean endoplasmic reticulum 60.08 61.79
GSMUA_Achr8P27620_001 Banana plastid 65.42 56.01
EES00147 Sorghum cytosol 56.92 55.92
KRH47202 Soybean cytosol 42.89 53.58
Bra031105.1-P Field mustard cytosol 13.24 50.76
OQU77891 Sorghum plastid 44.66 45.11
OQU88184 Sorghum mitochondrion, plastid 49.8 42.86
Protein Annotations
KEGG:00010+2.7.1.1KEGG:00051+2.7.1.1KEGG:00052+2.7.1.1KEGG:00500+2.7.1.1KEGG:00520+2.7.1.1KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1MapMan:3.1.4.3Gene3D:3.30.420.40Gene3D:3.40.367.20EntrezGene:8062170UniProt:C5XJZ6
ncoils:CoilEnsemblPlants:EES03587ProteinID:EES03587ProteinID:EES03587.1GO:GO:0000166GO:GO:0001678
GO:GO:0003674GO:GO:0003824GO:GO:0004340GO:GO:0004396GO:GO:0005488GO:GO:0005524
GO:GO:0005536GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739
GO:GO:0005829GO:GO:0005975GO:GO:0006091GO:GO:0006096GO:GO:0006139GO:GO:0008150
GO:GO:0008152GO:GO:0008865GO:GO:0009056GO:GO:0009058GO:GO:0009749GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0016773
GO:GO:0019158GO:GO:0019725GO:GO:0030246GO:GO:0046835GO:GO:0051156InterPro:Hexokinase
InterPro:Hexokinase_BSInterPro:Hexokinase_CInterPro:Hexokinase_NInterPro:IPR001312PFAM:PF00349PFAM:PF03727
PRINTS:PR00475ScanProsite:PS00378PFscan:PS51748PANTHER:PTHR19443PANTHER:PTHR19443:SF15EnsemblPlantsGene:SORBI_3003G291800
SUPFAM:SSF53067unigene:Sbi.16662TMHMM:TMhelixUniParc:UPI0001A84D6ARefSeq:XP_002458467.1SEG:seg
Description
hypothetical protein
Coordinates
chr3:-:62430807..62437380
Molecular Weight (calculated)
55069.3 Da
IEP (calculated)
6.338
GRAVY (calculated)
-0.075
Length
506 amino acids
Sequence
(BLAST)
001: MGKGAVVGTA VVVGAAAAAA VGVAVVSLSR RRRRRREAED ERKRKAAAVI EEVEQRFSTP TALLRGIADA MVEEMERGLR AEPHAPLKML ISYVDNLPTG
101: DEQGLFYALD LGGTNFRVIR VQLGGRDKRV VKQQYEEVSI PPHLMVGTST ELFDFIAAEL EKFVRTEGED FHLPNGKQRE LGFTFSFPVH QTSISSGTLI
201: KWTKGFSING TVGEDVVAEL SRAMERQGLD MKVAALVNDT VGTLAGGRYA DNDVVTAVIL GTGTNAAYVE HANAIPKWTG LLPRSGNMVI NMEWGNFRSD
301: KLPMSEYDKS LDFESLNPGE QIYEKMISGM YLGEIVRRIL LKLAHDASLF GDVVPPKLEQ LFILRTPDMS AMHHDTSHDL KHLGAKLKDI LGVPDTSLEA
401: RYITLHVCDL VAERGARLAA AGIYGILKKL GKDKLLSDFS QQRTVVAIDG GLYEHYKKFS ACLEATLTDL LGEEVASSVV VKLANDGSGI GAALLAASHS
501: QYAEVA
Best Arabidopsis Sequence Match ( AT4G29130.1 )
(BLAST)
001: MGKVAVGATV VCTAAVCAVA VLVVRRRMQS SGKWGRVLAI LKAFEEDCAT PISKLRQVAD AMTVEMHAGL ASDGGSKLKM LISYVDNLPS GDEKGLFYAL
101: DLGGTNFRVM RVLLGGKQER VVKQEFEEVS IPPHLMTGGS DELFNFIAEA LAKFVATECE DFHLPEGRQR ELGFTFSFPV KQTSLSSGSL IKWTKGFSIE
201: EAVGQDVVGA LNKALERVGL DMRIAALVND TVGTLAGGRY YNPDVVAAVI LGTGTNAAYV ERATAIPKWH GLLPKSGEMV INMEWGNFRS SHLPLTEFDH
301: TLDFESLNPG EQILEKIISG MYLGEILRRV LLKMAEDAAF FGDTVPSKLR IPFIIRTPHM SAMHNDTSPD LKIVGSKIKD ILEVPTTSLK MRKVVISLCN
401: IIATRGARLS AAGIYGILKK LGRDTTKDEE VQKSVIAMDG GLFEHYTQFS ECMESSLKEL LGDEASGSVE VTHSNDGSGI GAALLAASHS LYLEDS
Arabidopsis Description
HXK1Phosphotransferase [Source:UniProtKB/TrEMBL;Acc:Q0WLE0]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.