Factsheet for TraesCS1B01G142000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS6A01G186300.1
TraesCS6B01G218100.1
TraesCS6D01G173400.1
TraesCS7A01G362000.1
TraesCS7B01G265500.1
TraesCS7D01G361000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G29130.1	TraesCS6A01G186300.1	AT1G76030.1	21798944
AT4G29130.1	TraesCS6B01G218100.1	AT1G76030.1	21798944
AT4G29130.1	TraesCS6D01G173400.1	AT1G76030.1	21798944
AT4G29130.1	TraesCS7A01G362000.1	AT1G76030.1	21798944
AT4G29130.1	TraesCS7B01G265500.1	AT1G76030.1	21798944
AT4G29130.1	TraesCS7D01G361000.1	AT1G76030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G123700.1	Wheat	cytosol	98.06	98.06
TraesCS1A01G122800.1	Wheat	cytosol	97.19	97.19
HORVU1Hr1G028200.1	Barley	cytosol	94.38	94.38
Os05t0187100-02	Rice	cytosol	85.75	85.75
EES19165	Sorghum	cytosol	82.72	83.44
Zm00001d037689_P001	Maize	cytosol, extracellular	80.56	81.26
TraesCS3B01G127500.1	Wheat	cytosol	70.19	70.81
VIT_11s0016g03070.t01	Wine grape	plastid	67.39	62.78
TraesCS1B01G366400.1	Wheat	mitochondrion	66.52	62.47
KRH60208	Soybean	endoplasmic reticulum	64.58	60.04
KRH48988	Soybean	nucleus	64.58	60.04
KRH41490	Soybean	endoplasmic reticulum	64.58	60.04
KRH74246	Soybean	plastid	63.93	59.68
Solyc12g008510.1.1	Tomato	plastid	63.5	58.92
Bra039025.1-P	Field mustard	cytosol	63.28	58.6
PGSC0003DMT400000795	Potato	endoplasmic reticulum	63.07	58.52
CDY35895	Canola	plastid	63.07	58.4
CDX82746	Canola	cytosol	62.63	58.12
CDY48733	Canola	plastid	62.42	57.92
KRH74248	Soybean	nucleus	61.99	57.86
VIT_09s0002g03390.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	62.2	57.83
Bra036699.1-P	Field mustard	plastid	62.2	57.72
CDY03331	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	62.2	57.72
PGSC0003DMT400042598	Potato	plastid	61.77	57.66
Solyc06g066440.2.1	Tomato	plastid	61.77	57.66
AT2G19860.1	Thale cress	cytosol	62.2	57.37
TraesCS3B01G320500.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	45.79	57.14
AT4G29130.1	Thale cress	plastid	61.12	57.06
PGSC0003DMT400006474	Potato	mitochondrion	61.12	56.94
TraesCS1B01G355600.1	Wheat	golgi	62.2	56.8
Solyc03g121070.2.1	Tomato	plastid	60.91	56.63
KRH44270	Soybean	endoplasmic reticulum	59.61	56.1
TraesCS3B01G309700.3	Wheat	plastid	60.69	55.42
TraesCS2B01G016000.1	Wheat	mitochondrion, plastid	54.21	50.5
KRH47202	Soybean	cytosol	43.84	50.12
GSMUA_Achr6P05500_001	Banana	plastid	54.21	49.6
TraesCS3B01G525400.2	Wheat	plastid	50.54	46.25
Bra031105.1-P	Field mustard	cytosol	12.53	43.94
TraesCS1B01G248900.1	Wheat	mitochondrion, plastid	46.22	42.8

Protein Annotations

KEGG:00010+2.7.1.1	KEGG:00051+2.7.1.1	KEGG:00052+2.7.1.1	KEGG:00500+2.7.1.1	KEGG:00520+2.7.1.1	KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1	MapMan:3.1.4.3	Gene3D:3.30.420.40	Gene3D:3.40.367.20	GO:GO:0000166	GO:GO:0001678
GO:GO:0003674	GO:GO:0003824	GO:GO:0004396	GO:GO:0005488	GO:GO:0005524	GO:GO:0005536
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0016773	GO:GO:0019725	GO:GO:0030246	InterPro:Hexokinase	InterPro:Hexokinase_C	InterPro:Hexokinase_N
InterPro:IPR001312	PFAM:PF00349	PFAM:PF03727	PRINTS:PR00475	PFscan:PS51748	PANTHER:PTHR19443
PANTHER:PTHR19443:SF20	SUPFAM:SSF53067	EnsemblPlantsGene:TraesCS1B01G142000	EnsemblPlants:TraesCS1B01G142000.1	TIGR:cd00012	SEG:seg

Description

No Description!

Coordinates

chr1B:-:189715613..189718772

Molecular Weight (calculated)

50230.6 Da

IEP (calculated)

5.991

GRAVY (calculated)

-0.043

Length

463 amino acids

Sequence
(BLAST)

001: MVAAVDAVAE KVVAQLREEC ATPATRLDGV ATAMEEEMRA GLHQEAGSKI KMIISYVDNL PNGSEEGLFY ALDLGGTNFR VLRVQLAGKD KRVVKRESRE
101: VSIPPHLMSG SSAELFGFIA SALAKFVADE GDNKVLDGKQ RELGFTFSFP VRQSSIASGT LIKWTKAFAI DDAVGKDVVA ELQTAMEKQG IDMRVSALIN
201: DTVGTLATGS YNDEDVVIGV ILGTGSNAAY LEKADAIPKL EGELPKSGNM VINTEWGNFS SSCLPITEYD QALDKESLNP REQIFEKLIS GMYLGDIVRR
301: VLLKIASRSL IFGHIKRTNL KTRFILRTPD ISAMHHDETP DLRIVAEKLA ETLKIKDTSL ETRKMVVDIC DIVTSRSARL AAAGIVGIIR KIGRGTPGDK
401: RRTVIAIDGG LFEHYTKFRQ CLESTLVELL GEEASELVAV KLTKDGSGVG AALIAAAHSQ YLN

Best Arabidopsis Sequence Match ( AT1G47840.1 )
(BLAST)

001: MSLMFSSPVV TPALGSFTFS SRPRSNYIVM SAVRSNSAST CPILTKFQKD CATPTPYLRN VANAIADDMR DGLAVEGGGD LEMILTFVDA LPSGNEEGLF
101: YALDLGGTNF RVRSVQLGGK KERVLATESE QISISQKLMI GTSEELFGFI ASKLANFVAK EKPGRFLLEE GRKRELGFTF SFPVKQTSID SGTLSKWTKG
201: FKVSGMEGKN VVACLNEAME AHGLDMRVSA LVNDGVGTLA GARYWDEDVM VGVILGTGTN ACYVEQKHAI PKLRSKSSSG TTIINTEWGG FSKILPQTIF
301: DLEMDETSLN PGEHLYEKMI SGMYLGEIVR RVLLHMCETS DLFGHFAPAK LSTPLALRTE HLCKMQEDNT DDLRDVGSIL YDFLDVEANM NARRRVVEVC
401: DTVVKRGGRL AGAGIVAILE KIEKDTKRMG SGKRTVVAMD GALYEKYPQY RQYMQDALVE LLGHKLASHV AIKHTKDVSG LGAALLAATN SIY

Arabidopsis Description

HXK3Hexokinase-like 1 protein [Source:UniProtKB/Swiss-Prot;Acc:Q9FZG4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.