Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
22892874
extracellular: 29876421 |
msms PMID:
22892874
doi
Unité de Génétique et Amélioration des Fruits et Légumes, INRA, BP 94, 84143 Montfavet, France. ehkonozy@yahoo.com
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g119210.1.1 | Tomato | extracellular, nucleus | 70.21 | 70.97 |
| VIT_17s0000g03280.t01 | Wine grape | extracellular | 62.77 | 64.13 |
| KRH48557 | Soybean | extracellular | 61.7 | 62.37 |
| KRH39147 | Soybean | extracellular | 60.64 | 61.29 |
| Solyc02g086310.1.1 | Tomato | extracellular | 48.94 | 48.94 |
| Solyc03g034330.1.1 | Tomato | extracellular | 41.49 | 40.21 |
| Solyc03g034380.1.1 | Tomato | extracellular | 40.43 | 38.0 |
| Solyc03g034390.1.1 | Tomato | extracellular | 37.23 | 36.84 |
Protein Annotations
| EnsemblPlants:Solyc06g069070.1.1 | EnsemblPlantsGene:Solyc06g069070.1 | Gene3D:1.10.110.10 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 |
| InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | InterPro:nsLTP2 | PANTHER:PTHR33214 | PANTHER:PTHR33214:SF11 | PFAM:PF14368 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00499 | SUPFAM:SSF47699 | UniParc:UPI0002766780 | UniProt:K4C880 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6:+:42868895..42869179
Molecular Weight (calculated)
10210.0 Da
IEP (calculated)
10.245
GRAVY (calculated)
0.043
Length
94 amino acids
Sequence
(BLAST)
(BLAST)
1: MKRESKVMLV AMLVLMLLGE SHISLAATCS PVQLSPCLGA IRSSSPPSKL CCTKIKQQKP CLCQYLKNPT LKKYVNSPGA KKVARSCGVP YPRC
001: MSKTTTHQKH ISINSETNKR SRRNMVMIKT TMVSLFALAA VLLMILAPAA EAVTCSPMQL SPCATAITSS SPPSALCCAK LKEQRPCLCG YMRNPSLRRF
101: VSTPNARKVS KSCKLPIPRC
101: VSTPNARKVS KSCKLPIPRC
Arabidopsis Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP30]
SUBAcon: [endoplasmic reticulum,plastid,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,plastid,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.