Subcellular Localization
min:
: max
Winner_takes_all: extracellular, nucleus
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400014686 | Potato | extracellular | 93.55 | 93.55 |
| Solyc06g069070.1.1 | Tomato | extracellular | 70.97 | 70.21 |
| VIT_17s0000g03280.t01 | Wine grape | extracellular | 63.44 | 64.13 |
| KRH48557 | Soybean | extracellular | 59.14 | 59.14 |
| KRH39147 | Soybean | extracellular | 56.99 | 56.99 |
| Solyc02g086310.1.1 | Tomato | extracellular | 49.46 | 48.94 |
| Solyc03g034330.1.1 | Tomato | extracellular | 40.86 | 39.18 |
| Solyc03g034390.1.1 | Tomato | extracellular | 37.63 | 36.84 |
| Solyc03g034380.1.1 | Tomato | extracellular | 38.71 | 36.0 |
Protein Annotations
| EnsemblPlants:Solyc03g119210.1.1 | EnsemblPlantsGene:Solyc03g119210.1 | Gene3D:1.10.110.10 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 |
| InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | InterPro:nsLTP2 | PANTHER:PTHR33214 | PANTHER:PTHR33214:SF11 | PFAM:PF14368 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00499 | SUPFAM:SSF47699 | TMHMM:TMhelix | UniParc:UPI00027663DB |
| UniProt:K4BM70 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3:+:67871587..67871868
Molecular Weight (calculated)
9880.4 Da
IEP (calculated)
9.940
GRAVY (calculated)
0.306
Length
93 amino acids
Sequence
(BLAST)
(BLAST)
1: MKTASKLAVL TVLVLLLAEA HISVAVTCSA IQLSPCLSAI TSKSAPSKLC CSRIRQQKPC LCTYLKNPTL RNYVNSPGAK KVANTCGVPY PKC
001: MSKTTTHQKH ISINSETNKR SRRNMVMIKT TMVSLFALAA VLLMILAPAA EAVTCSPMQL SPCATAITSS SPPSALCCAK LKEQRPCLCG YMRNPSLRRF
101: VSTPNARKVS KSCKLPIPRC
101: VSTPNARKVS KSCKLPIPRC
Arabidopsis Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP30]
SUBAcon: [endoplasmic reticulum,plastid,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,plastid,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.