Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
- nucleus 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g097400.1.1 | Tomato | endoplasmic reticulum | 65.45 | 62.07 |
Protein Annotations
| MapMan:13.3.3.1.1 | MapMan:20.1.2.2.10 | GO:GO:0000923 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005856 | GO:GO:0007049 |
| GO:GO:0008150 | GO:GO:0008274 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0031021 | GO:GO:0033566 |
| GO:GO:0043015 | GO:GO:0051415 | GO:GO:0090307 | UniProt:K4C8Y9 | InterPro:MZT1 | PFAM:PF12554 |
| PANTHER:PTHR28520 | PANTHER:PTHR28520:SF5 | EnsemblPlantsGene:Solyc06g072690.1 | EnsemblPlants:Solyc06g072690.1.1 | UniParc:UPI00027659AF | SEG:seg |
Description
No Description!
Coordinates
chr6:-:44821865..44822032
Molecular Weight (calculated)
5741.8 Da
IEP (calculated)
4.755
GRAVY (calculated)
0.207
Length
55 amino acids
Sequence
(BLAST)
(BLAST)
1: MSNILDTGLD RHALSILIAL SELGFNPEAL AAVVKELHRE TPVSSSVQSS APSAP
1: MDEEASRTAR ESLELVFRMS NILDTGLDRH TLSVLIALCD LGVNPEALAT VVKELRRESI PDSVTTTPSI H
Arabidopsis Description
GIP1Mitotic-spindle organizing protein 1B [Source:UniProtKB/Swiss-Prot;Acc:Q9M0N8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.