Factsheet for Solyc12g006460.1.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

plastid 1
extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400062367	Potato	extracellular, golgi	93.63	93.63
Solyc10g007860.2.1	Tomato	endoplasmic reticulum, extracellular	49.9	50.52
Solyc08g007050.1.1	Tomato	endoplasmic reticulum	44.56	43.75
Solyc01g080900.2.1	Tomato	endoplasmic reticulum, golgi	41.68	40.85
KRH77221	Soybean	golgi	31.01	35.45
Solyc04g078900.2.1	Tomato	endoplasmic reticulum, extracellular	27.1	27.73
Solyc08g005610.2.1	Tomato	extracellular, golgi	25.26	26.23
Solyc08g075320.2.1	Tomato	endoplasmic reticulum, extracellular	23.82	25.16
Solyc01g108210.2.1	Tomato	endoplasmic reticulum, golgi	24.02	24.58
Solyc04g071150.2.1	Tomato	endoplasmic reticulum	23.82	24.32
Solyc02g084930.2.1	Tomato	endoplasmic reticulum, golgi	23.61	23.66
Solyc04g080650.2.1	Tomato	golgi, vacuole	21.15	22.59
Solyc07g064450.2.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	21.97	22.53
Solyc06g065420.1.1	Tomato	extracellular, golgi	21.77	22.32
Solyc07g042880.1.1	Tomato	endoplasmic reticulum, extracellular	21.15	21.37
Solyc05g021390.2.1	Tomato	endoplasmic reticulum	20.74	21.22
Solyc06g065430.2.1	Tomato	extracellular, plasma membrane	19.92	20.42
Solyc02g069600.2.1	Tomato	extracellular, vacuole	19.51	20.26
Solyc07g055970.1.1	Tomato	extracellular, golgi	20.33	20.08
Solyc11g056670.1.1	Tomato	extracellular	19.1	19.5
Os05t0101600-01	Rice	endoplasmic reticulum, plasma membrane	17.86	16.8
Os06t0110100-01	Rice	cytosol	1.44	2.34
Os05t0101400-01	Rice	plastid	0.21	0.73

Protein Annotations

Gene3D:1.10.630.10	MapMan:11.6.1.3	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006629	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009686	GO:GO:0009987	GO:GO:0010268
GO:GO:0016020	GO:GO:0016021	GO:GO:0016125	GO:GO:0016132	GO:GO:0016491	GO:GO:0016705
GO:GO:0020037	GO:GO:0046872	GO:GO:0051777	GO:GO:0055114	InterPro:IPR036396	UniProt:K4DBI3
PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF67
SUPFAM:SSF48264	EnsemblPlantsGene:Solyc12g006460.1	EnsemblPlants:Solyc12g006460.1.1	TMHMM:TMhelix	UniParc:UPI000276A7C5	SEG:seg

Description

No Description!

Coordinates

chr12:-:934011..938703

Molecular Weight (calculated)

56304.5 Da

IEP (calculated)

8.382

GRAVY (calculated)

-0.148

Length

487 amino acids

Sequence
(BLAST)

001: MDFYNLALFF IALILGIFTF YAILMRINGW YYAIKFCSNK YNIPNGYMGL PYFGNTLSYF KASMCGDPKS FIDFFATRFG EGGMYRAYIF GKPTIMVTKP
101: EIIRKVLMDE EYLERGLPNY MKKLIGLTTS IEEDKYFRRL TAPVKSHGLL SDYFDYIDKT VSSTLEKYAT TEEPVEFLHK MHKLTFEVFM RLLIGDEVNQ
201: ELFDEMFEEI TAVISGVHNL PINLPGFAYH KGLKARKVLG EVFKKLIDER REAMKDGKSM PKANIIDMLL SNNNQDYEAN MLSDKKIIEI LVLFSFAGFE
301: PVALMSVKAI FHLQKHPHFL EKAKEEQEEI VKRRASSNAG LSFDEIRQMT FVSKIINETL RIATDQSVFL RDTSTTFNIN GYTIPKGWKF FAVVWNIHMN
401: PDVYVQPKEF NPSRWDDIET KPGIFLPFSM GPKSCPGSNL AKLQISVILH YYLLHYRVEQ INPEARCYPP ENCLVKFKKL SISSNGN

Best Arabidopsis Sequence Match ( AT2G32440.2 )
(BLAST)

001: MTETGLILMW FPLIILGLFV LKWVLKRVNV WIYVSKLGEK KHYLPPGDLG WPVIGNMWSF LRAFKTSDPE SFIQSYITRY GRTGIYKAHM FGYPCVLVTT
101: PETCRRVLTD DDAFHIGWPK STMKLIGRKS FVGISFEEHK RLRRLTSAPV NGPEALSVYI QFIEETVNTD LEKWSKMGEI EFLSHLRKLT FKVIMYIFLS
201: SESEHVMDSL EREYTNLNYG VRAMGINLPG FAYHRALKAR KKLVAAFQSI VTNRRNQRKQ NISSNRKDML DNLIDVKDEN GRVLDDEEII DLLLMYLNAG
301: HESSGHLTMW ATILMQEHPM ILQKAKEEQE RIVKKRAPGQ KLTLKETREM VYLSQVIDET LRVITFSLTA FREAKSDVQM DGYIIPKGWK VLTWFRNVHL
401: DPEIYPDPKK FDPSRWEGYT PKAGTFLPFG LGSHLCPGND LAKLEISIFL HHFLLKYRVE RSNPGCPVMF LPHNRPKDNC LARITRTMP

Arabidopsis Description

KAO2KAO2 [Source:UniProtKB/TrEMBL;Acc:A0A178VZF6]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.