Factsheet for TraesCS1A01G025900.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G026200.2	Wheat	nucleus	98.7	98.7
TraesCS1B01G032500.2	Wheat	nucleus	95.94	95.78
HORVU1Hr1G003750.1	Barley	mitochondrion	94.47	81.03
Zm00001d049745_P001	Maize	cytosol	37.24	80.63
Os05t0108300-01	Rice	cytosol	80.65	79.87
Zm00001d049231_P001	Maize	cytosol	26.18	76.67
KRH33000	Soybean	cytosol, peroxisome	27.97	76.11
EES17554	Sorghum	nucleus	79.19	75.39
Zm00001d035695_P001	Maize	cytosol	78.7	63.27
Bra019537.1-P	Field mustard	cytosol, nucleus, plastid	49.27	58.72
CDY21817	Canola	cytosol, nucleus, plastid	49.27	58.72
CDX77897	Canola	cytosol, nucleus, plastid	49.27	58.61
AT3G48260.1	Thale cress	cytosol, nucleus, plastid	48.62	57.95
KRH54305	Soybean	cytosol, nucleus, plastid	54.15	57.02
KRH63640	Soybean	cytosol, nucleus, plastid	54.15	55.59
Solyc06g071800.2.1	Tomato	nucleus	53.5	52.56
Solyc03g112140.2.1	Tomato	nucleus	55.12	51.05
GSMUA_Achr6P12140_001	Banana	nucleus	55.45	50.44
TraesCS2A01G190200.1	Wheat	mitochondrion	26.18	49.69
VIT_17s0000g09380.t01	Wine grape	nucleus	53.98	49.63
PGSC0003DMT400046841	Potato	nucleus	54.8	47.46
GSMUA_Achr10P...	Banana	nucleus	55.94	46.24
TraesCS3A01G240400.1	Wheat	cytosol	9.76	43.48
TraesCS5A01G315400.1	Wheat	cytosol	10.89	41.36
TraesCS5A01G321400.2	Wheat	cytosol	29.92	41.16
TraesCS3A01G193000.1	Wheat	cytosol	10.73	40.74
PGSC0003DMT400069406	Potato	cytosol	28.94	39.29
TraesCS6A01G255100.2	Wheat	cytosol, nucleus, plastid	37.89	37.82
TraesCS2A01G195900.2	Wheat	cytosol	41.14	36.09
TraesCS5A01G147500.1	Wheat	cytosol	35.28	34.07

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.2.4	Gene3D:3.10.20.90	Gene3D:3.30.200.20	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:Kinase_OSR1/WNK_CCT	PFAM:PF00069	PFAM:PF12202
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR13902	PANTHER:PTHR13902:SF102	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS1A01G025900	EnsemblPlants:TraesCS1A01G025900.2	TIGR:cd13983	SEG:seg

Description

No Description!

Coordinates

chr1A:+:12363889..12369338

Molecular Weight (calculated)

68702.0 Da

IEP (calculated)

4.817

GRAVY (calculated)

-0.619

Length

615 amino acids

Sequence
(BLAST)

001: MPPTPPPETD AEPEFAEIDP TGRYGRYTEV LGKGAFKTVY KAFDQLEGLE VAWNQIKVGD ILRNNDDLER LRSEVRLLKT LKHKNIIKFY NSWLDKKNNN
101: INFITEVFTS GTLRQYRIKH KKVDIRALKK WSRQILSGLV YLHGHDPPII HRDLKCDNIF VNGNQGEVKI GDLGLATILD NARSAHSIIG NRFSTPEFMA
201: PELYDEEYNE LVDIYAFGMC LLELVTFEYP YCECSNAAQI YKKVSDGERP GSLAKIEDPE VKFFIEKCIA QASQRLSAEE LLVDPFLLDV DDERIFYPVQ
301: SNTNASDAGG SSNPSANYRT ASSVGSRGRT GSTGGSHPSD IHSNRDRHAA SSRMITVESQ RKDLNTIFLK LRIADSTGHA QNIHFPFDIE ADTSISVATE
401: MVVQLDLTDQ DVTAIAEMID AEIQAHIPEW AFDESVDNQG DEGAHSETDN SESDNGETSE LRNEVDATTN GFTQEQLPSG RKYWSDSPRR DIEISHSVED
501: QQTDDNMPNG ILKNNNVDGM CERMSSSVHL SNPDAVNRNS GGASAGTSSR LSDGGYLTAD LNEKLADLLA NQKEELSALR RKHKADLEVI LNGVPAQHRE
601: ETLTRCRLKA DQKKL

Best Arabidopsis Sequence Match ( AT3G48260.1 )
(BLAST)

001: MRQDENNSEE EFVEIDPTGR YGRYKEVLGK GAFKEVYRAF DQLEGIEVAW NQVKLDDKFC SSEDLDRLYS EVHLLKTLKH KSIIKFYTSW IDHQHMTINL
101: ITEVFTSGNL RQYRKKHKCV DLRALKKWSR QILEGLVYLH SHDPPVIHRD LKCDNIFING NQGEVKIGDL GLAAILHRAR SAHSVIGTPE FMAPELYEED
201: YNVLVDIYAF GMCLLELVTF EYPYSECTNA AQIYRKVTSG IKPAALLNVT DPQVRAFIEK CIAKVSQRLS AKELLDDPFL KCYKENTENV SSHKENGYNG
301: NGIVDKLSDS EVGLLTVEGQ RKDLNTIFLK LRITDSKGQI RNIHFPFNIE TDTSFSVAIE MVEELDLTDD QDISTIAKMI DTEIHSHIPD WTPSRLIGDD
401: SAVQKCLSSP ETLHLDRFPS GRKFWSSPKA GAGDSRSPFA PRSNSKLSSA QGPINQEVGV IVEKLESLLR KQREEIEEMQ RDQERIVTEF LKEFPPEICE
501: EALVRLQVKD SDNLLC

Arabidopsis Description

WNK3Probable serine/threonine-protein kinase WNK3 [Source:UniProtKB/Swiss-Prot;Acc:Q9STK6]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.