Factsheet for VIT_17s0000g09380.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33000	Soybean	cytosol, peroxisome	28.7	84.96
KRH54305	Soybean	cytosol, nucleus, plastid	59.49	68.15
KRH63640	Soybean	cytosol, nucleus, plastid	60.24	67.28
AT3G48260.1	Thale cress	cytosol, nucleus, plastid	50.37	65.31
Bra019537.1-P	Field mustard	cytosol, nucleus, plastid	49.78	64.53
CDY21817	Canola	cytosol, nucleus, plastid	49.78	64.53
Solyc06g071800.2.1	Tomato	nucleus	60.09	64.22
CDX77897	Canola	cytosol, nucleus, plastid	49.63	64.22
Zm00001d049745_P001	Maize	cytosol	26.91	63.38
Solyc03g112140.2.1	Tomato	nucleus	61.73	62.2
VIT_19s0090g01690.t01	Wine grape	cytosol	27.06	60.94
PGSC0003DMT400046841	Potato	nucleus	62.48	58.87
GSMUA_Achr6P12140_001	Banana	nucleus	55.9	55.33
VIT_12s0057g00520.t01	Wine grape	cytosol, plastid	27.35	54.3
Os05t0108300-01	Rice	cytosol	50.37	54.27
TraesCS1D01G026200.2	Wheat	nucleus	49.78	54.15
TraesCS1A01G025900.2	Wheat	nucleus	49.63	53.98
TraesCS1B01G032500.2	Wheat	nucleus	49.33	53.57
Zm00001d049231_P001	Maize	cytosol	16.74	53.33
EES17554	Sorghum	nucleus	50.52	52.32
PGSC0003DMT400069406	Potato	cytosol	35.43	52.32
GSMUA_Achr10P...	Banana	nucleus	56.35	50.67
VIT_10s0116g00480.t01	Wine grape	cytosol	30.19	48.44
VIT_17s0053g01080.t01	Wine grape	cytosol, vacuole	12.86	46.74
HORVU1Hr1G003750.1	Barley	mitochondrion	49.33	46.03
Zm00001d035695_P001	Maize	cytosol	50.22	43.92
VIT_02s0025g02360.t01	Wine grape	nucleus	38.86	40.12
VIT_14s0030g01660.t01	Wine grape	cytosol	43.35	40.11
VIT_05s0020g03380.t01	Wine grape	cytosol	43.65	39.95
VIT_06s0004g07920.t01	Wine grape	cytosol	37.52	39.78
VIT_15s0046g00100.t01	Wine grape	cytosol	37.07	39.18
VIT_08s0058g01130.t01	Wine grape	cytosol	35.28	37.7
VIT_04s0044g00850.t01	Wine grape	cytosol	36.62	35.2
VIT_05s0136g00340.t01	Wine grape	cytosol	6.88	14.84

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:100250110	wikigene:100250110	MapMan:18.4.2.4	Gene3D:3.10.20.90	Gene3D:3.30.200.20	ProteinID:CCB42930
ProteinID:CCB42930.1	ncoils:Coil	UniProt:F6GTR4	EMBL:FN594950	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:Kinase_OSR1/WNK_CCT
EntrezGene:LOC100250110	wikigene:LOC100250110	PFAM:PF00069	PFAM:PF12202	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR13902	PANTHER:PTHR13902:SF107	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
TIGR:TC61213	UniParc:UPI00019851E7	ArrayExpress:VIT_17s0000g09380	EnsemblPlantsGene:VIT_17s0000g09380	EnsemblPlants:VIT_17s0000g09380.t01	unigene:Vvi.9487
RefSeq:XP_002277287	RefSeq:XP_002277287.1	RefSeq:XP_010663089.1	:	:	:

Description

No Description!

Coordinates

chr17:-:10966252..10980394

Molecular Weight (calculated)

74917.5 Da

IEP (calculated)

5.184

GRAVY (calculated)

-0.460

Length

669 amino acids

Sequence
(BLAST)

001: MPQVLSSEQD PDDPDTEFVE IDPTGRYGRY KEVLGKGAFK KVYRAFDELE GIEVAWNQVK VADLLRNSEE FERLYSEVHL LKTLKHKNII KFYISWVDTR
101: NENINFITEI FTSGTLRQYR KKHKHVDLRA LKKWSRQILE GLLYLHSHDP PVIHRDLKCD NIFVNGNQGE VKIGDLGLAA ILRQARSAHS VIGTPEFMAP
201: ELYEEEYNEL VDIYAFGMCL LELVTFEYPY VECANAAQIY KKVTSGIKPA SLAKVKDPRV RAFIDKCIAN VSDRLSAKEL LRDPFLQSDE ENGSVGRSLQ
301: PHPHHSGSHD HFNTGTSSKV SLPESSRDFK VQGQRRDVNT IFLKLRIADS KGHIRNIHFP FDIGADTAIS VAGEMVEELD LTDQDVSTIA AMIDSEIRSI
401: ISDWPPSREV FGDNLSTEVA ISDICPPESE GDALPLMNES ATSSCGLVLE RLPSGRRYWS DSPKAVGGNS PIRPAFSNLS SQVDSVTTEG RFSELNEQSL
501: ASPRDGDKLN TAASLDKRED ERVCGDDDVE EKEASISAET QFSDQNDVAV ELLGGYRAPS WGGNCKILRE TELGDAKVIV EKLKHLFVKQ QKELDELKRK
601: HELAILDLVK ELPPDIRNKV SSLCNLKISG SFSKMEPMSS EVSNLAVYNN LDTYSIGPTN VKLSLPKKG

Best Arabidopsis Sequence Match ( AT3G48260.1 )
(BLAST)

001: MRQDENNSEE EFVEIDPTGR YGRYKEVLGK GAFKEVYRAF DQLEGIEVAW NQVKLDDKFC SSEDLDRLYS EVHLLKTLKH KSIIKFYTSW IDHQHMTINL
101: ITEVFTSGNL RQYRKKHKCV DLRALKKWSR QILEGLVYLH SHDPPVIHRD LKCDNIFING NQGEVKIGDL GLAAILHRAR SAHSVIGTPE FMAPELYEED
201: YNVLVDIYAF GMCLLELVTF EYPYSECTNA AQIYRKVTSG IKPAALLNVT DPQVRAFIEK CIAKVSQRLS AKELLDDPFL KCYKENTENV SSHKENGYNG
301: NGIVDKLSDS EVGLLTVEGQ RKDLNTIFLK LRITDSKGQI RNIHFPFNIE TDTSFSVAIE MVEELDLTDD QDISTIAKMI DTEIHSHIPD WTPSRLIGDD
401: SAVQKCLSSP ETLHLDRFPS GRKFWSSPKA GAGDSRSPFA PRSNSKLSSA QGPINQEVGV IVEKLESLLR KQREEIEEMQ RDQERIVTEF LKEFPPEICE
501: EALVRLQVKD SDNLLC

Arabidopsis Description

WNK3Probable serine/threonine-protein kinase WNK3 [Source:UniProtKB/Swiss-Prot;Acc:Q9STK6]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.