Factsheet for VIT_05s0020g03380.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG91296	Soybean	cytosol	67.72	67.81
GSMUA_Achr6P29650_001	Banana	cytosol	41.59	67.71
VIT_14s0030g01660.t01	Wine grape	cytosol	66.76	67.5
KRH35527	Soybean	cytosol	66.62	66.71
GSMUA_Achr9P25350_001	Banana	cytosol	46.65	63.03
GSMUA_Achr8P15460_001	Banana	cytosol	52.39	62.68
VIT_19s0090g01690.t01	Wine grape	cytosol	24.21	59.6
EER97416	Sorghum	cytosol	52.67	54.77
Zm00001d006644_P002	Maize	cytosol	52.53	54.62
Os07t0572800-01	Rice	cytosol	52.53	54.55
Zm00001d021875_P002	Maize	cytosol	52.12	54.04
GSMUA_Achr9P11110_001	Banana	cytosol, nucleus, peroxisome	55.54	53.0
TraesCS2D01G203900.2	Wheat	cytosol	50.75	52.77
TraesCS2B01G223600.1	Wheat	cytosol	50.75	52.77
TraesCS2A01G195900.2	Wheat	cytosol	50.21	52.35
HORVU2Hr1G037990.5	Barley	cytosol	48.02	51.47
VIT_12s0057g00520.t01	Wine grape	cytosol, plastid	23.67	51.34
VIT_10s0116g00480.t01	Wine grape	cytosol	27.09	47.48
VIT_17s0053g01080.t01	Wine grape	cytosol, vacuole	11.63	46.2
VIT_17s0000g09380.t01	Wine grape	nucleus	39.95	43.65
VIT_06s0004g07920.t01	Wine grape	cytosol	36.11	41.84
VIT_08s0058g01130.t01	Wine grape	cytosol	35.43	41.37
VIT_02s0025g02360.t01	Wine grape	nucleus	35.43	39.97
VIT_15s0046g00100.t01	Wine grape	cytosol	33.93	39.18
VIT_04s0044g00850.t01	Wine grape	cytosol	34.88	36.64
VIT_05s0136g00340.t01	Wine grape	cytosol	6.84	16.13

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:100240750	wikigene:100240750	MapMan:18.4.2.4	Gene3D:3.10.20.90	Gene3D:3.30.200.20	ProteinID:CCB50419
ProteinID:CCB50419.1	ncoils:Coil	UniProt:F6HDP8	EMBL:FN595749	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:Kinase_OSR1/WNK_CCT
EntrezGene:LOC100240750	wikigene:LOC100240750	PFAM:PF00069	PFAM:PF12202	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR13902	PANTHER:PTHR13902:SF105	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
TIGR:TC63268	UniParc:UPI000210A12D	ArrayExpress:VIT_05s0020g03380	EnsemblPlantsGene:VIT_05s0020g03380	EnsemblPlants:VIT_05s0020g03380.t01	unigene:Vvi.17409
RefSeq:XP_002278361	RefSeq:XP_002278361.1	RefSeq:XP_010649893.1	:	:	:

Description

No Description!

Coordinates

chr5:+:5145523..5148774

Molecular Weight (calculated)

83733.1 Da

IEP (calculated)

4.826

GRAVY (calculated)

-0.636

Length

731 amino acids

Sequence
(BLAST)

001: MNCVTELEPD YSEFVEVDPT GRYGRYNEIL GKGASKTVYR AFDEYEGIEV AWNQVKLNDF LQSPEELERL YCEIHLLKTL KHNNIMKFYT SWVDPANRNI
101: NFVTEMFTSG TLRQYRLKHR RVNIRAVKHW CRQILRGLLY LHNHKPPVIH RDLKCDNIFV NGNQGEVKIG DLGLAAILRK SHAAHCVGTP EFMAPEVYEE
201: EYNELVDIYS FGMCILEMVT FEYPYSECTH PAQIYKKVIS GKKPDALYKV KDPEVRQFVE KCLATVTLRL SARELLKDPF LQSDDYGSDL RPIEYQRDLG
301: EVGPLPRLPH YGIHHSYSSL RNEYSGYPDF EPENGLDCHP VEFERNEIDL FTYQEDEHLE NVDISIEGRK RDDHGIFLRL RISDKEGRVR NIYFPFDMET
401: DTALSVAMEM VSELDITDQD VTKIADMIDD EIASLVPGWK MGLGIEESQN YGHDASFCHH CASNGSPLDY VSPNNPGTKN LQVLQCSRQG CAAVHGRFEE
501: ITYRVEGSEQ CVTEGAPVVS SQSDGMQYAD IWAQREGPEL SSEGSREIQS DEEHESLDKS IYGKDERVIN IDNQSESNAK NSFAPLDDYE NEIRQELRWL
601: KAKYQMQLRE LRDQQLGAKP KWLSLTPNSD SMEHSRDNKV SPSSLSTPLE GEDNDPPLKS FPCGKHFNSF FPVDTERGCA NLAYRRPHNR EPVSESCSPE
701: DMVTAKSFFT GTLLPQSLHR ATSLPVDAVD F

Best Arabidopsis Sequence Match ( AT3G04910.1 )
(BLAST)

001: MNNLSYLEPD YSEFVEVDPT GRYGRYNEVL GKGASKTVYR AFDEYEGIEV AWNQVKLYDF LQSPEDLERL YCEIHLLKTL KHKNIMKFYT SWVDTANRNI
101: NFVTELFTSG TLRQYRLRHK RVNIRAMKHW CRQILRGLHY LHSHDPPVIH RDLKCDNIFV NGNQGEVKIG DLGLAAILRK SHAAHCVGTP EFMAPEVYEE
201: AYNELVDIYS FGMCILEMVT FDYPYSECTH PAQIYKKVMS GKKPDALYKV KDPEVKCFIE KCLATVSLRV SARELLDDPF LRIDDGEFDL RSVDMEDSVG
301: PLYRQPHHLP DYYNYPSNSS SLNRQYSNGN YPSNSSSLNR QYSNGYNSHH EYQNGWAYNP AETEETHGIE LFESRNNDDQ EEEKKSGNVD ITIKGKRRDD
401: GGLFLRLRIA DKEGRVRNIY FPFDIETDTA LSVATEMVAE LDMDDHGVTK IANMIDGEIS SLVPSWRPGP EFEECLAAAA AANAASICNN CVSNRTSMGS
501: VMDFLRTNPG ANVIQCCRNG CGETHGRFEE ITIRETEVRL RELWKLQQQQ ESRELSSIDS GHNHSEEEEE EEVLYEDPEN MFSCEAGNEI NHISGSGSFS
601: FMPSKYCDEP SEKTENQVQQ ELRWLKAKCQ IELRDIQDEQ LKTRWPESGE EVEISPKDGF LGSVSGLGRE EDTVKEMFGE RLVPKCLKRT TSLPVDAIDS

Arabidopsis Description

WNK1Serine/threonine-protein kinase WNK1 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAV6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.