Factsheet for VIT_05s0136g00340.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0025g02360.t01	Wine grape	nucleus	74.52	35.65
PGSC0003DMT400048610	Potato	nucleus	22.58	15.56
VIT_15s0046g00100.t01	Wine grape	cytosol	27.1	13.27
VIT_04s0044g00850.t01	Wine grape	cytosol	20.32	9.05
VIT_17s0000g09380.t01	Wine grape	nucleus	14.84	6.88
VIT_05s0020g03380.t01	Wine grape	cytosol	16.13	6.84
VIT_14s0030g01660.t01	Wine grape	cytosol	15.16	6.5
VIT_06s0004g07920.t01	Wine grape	cytosol	11.61	5.71
VIT_08s0058g01130.t01	Wine grape	cytosol	10.97	5.43
VIT_10s0116g00480.t01	Wine grape	cytosol	5.16	3.84
VIT_17s0053g01080.t01	Wine grape	cytosol, vacuole	1.94	3.26
VIT_19s0090g01690.t01	Wine grape	cytosol	0.32	0.34
VIT_12s0057g00520.t01	Wine grape	cytosol, plastid	0.32	0.3

Protein Annotations

Gene3D:3.10.20.90	MapMan:35.1	MEROPS:A11.004	EMBL:AM476716	ProteinID:CAN79492	ProteinID:CAN79492.1
ProteinID:CCB62733	ProteinID:CCB62733.1	ncoils:Coil	UniProt:F6I715	EMBL:FN596762	GO:GO:0003674
GO:GO:0003676	GO:GO:0003824	GO:GO:0003924	GO:GO:0004190	GO:GO:0004672	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006259
GO:GO:0006464	GO:GO:0006468	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0009987	GO:GO:0015074	GO:GO:0016301	GO:GO:0016740	GO:GO:0016787	GO:GO:0019538
PANTHER:PTHR13902	PANTHER:PTHR13902:SF107	UniParc:UPI000210A540	ArrayExpress:VIT_05s0136g00340	EnsemblPlantsGene:VIT_05s0136g00340	EnsemblPlants:VIT_05s0136g00340.t01

Description

No Description!

Coordinates

chr5:+:13705864..13708039

Molecular Weight (calculated)

34070.9 Da

IEP (calculated)

4.457

GRAVY (calculated)

-0.530

Length

310 amino acids

Sequence
(BLAST)

001: MDMDPNYKKL SMSTHMKSIS GTPHFPALQF ERFNKNNLFK LRGEKIDDSS ISMTLHLADP CRAKSIHFAF YLDSDTALSI AGEMVEQLDF SNEDVAVIAE
101: LIDVMTSELV PTWKPAFKSM LCGANSSCED SLVLHNGGTS LRHPCDSGSA KGTSDTVTEQ HPISLLANGE EQSTVESALS GMSTKDDATV ASDANDIKSL
201: ECPDDECYEA SDRCCFNRDR QVLDPYSFPS DIVKEACRGP TIEDASGQTR GRETEPTARD RGRKDKSCDT VANMEARLAK VELAMANTQE GLDLIEQGME
301: KGMKDLREQI

Best Arabidopsis Sequence Match ( AT5G41990.1 )
(BLAST)

001: MASGSGFLGQ ISSMEEADFA EKDPSGRYIR YDDVLGRGAF KTVYKAFDEV DGIEVAWNLV SIEDVMQMPG QLERLYSEVH LLKALKHENI IKLFYSWVDE
101: KNKTINMITE LFTSGSLRVY RKKHRKVDPK AIKNWARQIL KGLNYLHSQN PPVIHRDLKC DNIFVNGNTG EVKIGDLGLA TVLQQPTARS VIGTPEFMAP
201: ELYEEEYNEL VDIYSFGMCM LEMVTCEYPY NECRNQAQIY KKVTSNIKPQ SLGKVDDPQV RQFIEKCLLP ASSRPTALEL SKDPFLARDG GKDSALLASS
301: STSSKYVRPP QLEHLPMDVD HNENKSVSSN EDYPWSQTIE LQRIAENKEF RLRGERSDDV TASMVLRIAD PSGKCRIVHF AFYLESDTAT AIAEEMVEEL
401: HLTSQEVVVI ADMIDDFIMQ LLSDRTSSHH NQNSPRLTHE DHEAANQQTV NSKDEEAAGQ SMKSDISADY YFPYSANDGN AAMEAGRDAE SMSSYLDSCS
501: MMSTIYNLSI SDNDYPEDLK TELNLIESQF NQSFQDLLKL KEDAIENAKR KWITKKQKAV NIS

Arabidopsis Description

WNK8Serine/threonine-protein kinase WNK8 [Source:UniProtKB/Swiss-Prot;Acc:Q944Q0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.