Factsheet for VIT_10s0116g00480.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0090g01690.t01	Wine grape	cytosol	39.09	54.88
Solyc02g087590.1.1	Tomato	cytosol	25.9	51.43
PGSC0003DMT400086606	Potato	cytosol	36.93	50.16
Solyc10g009060.1.1	Tomato	cytosol	37.89	49.07
VIT_12s0057g00520.t01	Wine grape	cytosol, plastid	39.09	48.37
VIT_17s0053g01080.t01	Wine grape	cytosol, vacuole	21.1	47.83
PGSC0003DMT400058754	Potato	cytosol	36.93	47.53
PGSC0003DMT400097683	Potato	cytosol	36.69	45.27
VIT_02s0025g02360.t01	Wine grape	nucleus	67.15	43.21
VIT_15s0046g00100.t01	Wine grape	cytosol	60.67	39.97
Solyc11g039590.1.1	Tomato	plasma membrane	14.87	36.05
VIT_04s0044g00850.t01	Wine grape	cytosol	54.44	32.61
VIT_06s0004g07920.t01	Wine grape	cytosol	47.72	31.54
VIT_17s0000g09380.t01	Wine grape	nucleus	48.44	30.19
VIT_08s0058g01130.t01	Wine grape	cytosol	44.12	29.39
VIT_05s0020g03380.t01	Wine grape	cytosol	47.48	27.09
VIT_14s0030g01660.t01	Wine grape	cytosol	46.76	26.97
VIT_05s0136g00340.t01	Wine grape	cytosol	3.84	5.16

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100250308	wikigene:100250308	MapMan:18.4.2.4	Gene3D:3.30.200.20	UniProt:A5AW53
EMBL:AM437807	ProteinID:CAN76120	ProteinID:CAN76120.1	ProteinID:CCB48165	ProteinID:CCB48165.1	EMBL:FN595248
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100250308	wikigene:LOC100250308	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR13902	PANTHER:PTHR13902:SF107	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	TIGR:TC65090	UniParc:UPI000151FA80	ArrayExpress:VIT_10s0116g00480	EnsemblPlantsGene:VIT_10s0116g00480	EnsemblPlants:VIT_10s0116g00480.t01
unigene:Vvi.1726	RefSeq:XP_002267815	RefSeq:XP_002267815.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr10:+:222831..224588

Molecular Weight (calculated)

47346.1 Da

IEP (calculated)

6.910

GRAVY (calculated)

-0.326

Length

417 amino acids

Sequence
(BLAST)

001: MESAEDFVEK DPSGRYVRYN EFLGKGAFKT VYKGFDEDDG TEVAWCQVDI DDVLQSPEEV QRSLYSEVNL IKSLKHENII KCYNSWVNDE KKTINIITEL
101: FTSGSLRQYR KKHKNVDLKA IKNWSRQILR GLHYLHTHNP PIIHRDLKCD NIFVNGFNGQ VKIGDLGLAI VMQQPFARSC IGTPEFMAPE LYDEEYNELV
201: DIYSFGMCVL EMVTGEYPYS ECTNPAQIFK KVTSGVKPAA LSRVGDPQVK QFIEKCLVPA SLRLSAEELL KDPFLASENS KDRVCNTLLL SNFMPKVMSS
301: PKPQSCVSTN NLASESSEEL VCNPLQLSHL VPKSMNSAKL QLLTLQMDPD WQKLLVGMRN RSLSIISSFA LAKKGLKLDL DAVHMQNQQC LSQLLRQREE
401: VAEDAKGRWI IKKIPVI

Best Arabidopsis Sequence Match ( AT5G41990.1 )
(BLAST)

001: MASGSGFLGQ ISSMEEADFA EKDPSGRYIR YDDVLGRGAF KTVYKAFDEV DGIEVAWNLV SIEDVMQMPG QLERLYSEVH LLKALKHENI IKLFYSWVDE
101: KNKTINMITE LFTSGSLRVY RKKHRKVDPK AIKNWARQIL KGLNYLHSQN PPVIHRDLKC DNIFVNGNTG EVKIGDLGLA TVLQQPTARS VIGTPEFMAP
201: ELYEEEYNEL VDIYSFGMCM LEMVTCEYPY NECRNQAQIY KKVTSNIKPQ SLGKVDDPQV RQFIEKCLLP ASSRPTALEL SKDPFLARDG GKDSALLASS
301: STSSKYVRPP QLEHLPMDVD HNENKSVSSN EDYPWSQTIE LQRIAENKEF RLRGERSDDV TASMVLRIAD PSGKCRIVHF AFYLESDTAT AIAEEMVEEL
401: HLTSQEVVVI ADMIDDFIMQ LLSDRTSSHH NQNSPRLTHE DHEAANQQTV NSKDEEAAGQ SMKSDISADY YFPYSANDGN AAMEAGRDAE SMSSYLDSCS
501: MMSTIYNLSI SDNDYPEDLK TELNLIESQF NQSFQDLLKL KEDAIENAKR KWITKKQKAV NIS

Arabidopsis Description

WNK8Serine/threonine-protein kinase WNK8 [Source:UniProtKB/Swiss-Prot;Acc:Q944Q0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.