Factsheet for PGSC0003DMT400086606

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g087590.1.1	Tomato	cytosol	62.87	91.9
PGSC0003DMT400058754	Potato	cytosol	79.15	75.0
PGSC0003DMT400097683	Potato	cytosol	74.27	67.46
PGSC0003DMT400015698	Potato	cytosol	40.72	43.1
PGSC0003DMT400057113	Potato	cytosol	42.35	42.48
PGSC0003DMT400077830	Potato	cytosol	40.39	42.18
VIT_10s0116g00480.t01	Wine grape	cytosol	50.16	36.93
PGSC0003DMT400031918	Potato	cytosol	48.86	25.47
PGSC0003DMT400011279	Potato	cytosol	44.95	23.15
PGSC0003DMT400078269	Potato	cytosol	44.95	21.73
PGSC0003DMT400000351	Potato	plastid	47.56	21.1
PGSC0003DMT400046841	Potato	nucleus	47.23	20.42
PGSC0003DMT400077354	Potato	cytosol	45.93	19.29
PGSC0003DMT400057980	Potato	cytosol	44.63	18.32
PGSC0003DMT400069406	Potato	cytosol	21.17	14.35
PGSC0003DMT400048610	Potato	nucleus	14.98	10.22

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:107060312	MapMan:18.4.2.4	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1DC43	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400036177	PGSC:PGSC0003DMG400036177
EnsemblPlants:PGSC0003DMT400086606	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR13902	PANTHER:PTHR13902:SF108
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002953FBF	RefSeq:XP_015163529.1

Description

With no lysine kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400036177]

Coordinates

chr2:+:46493490..46494413

Molecular Weight (calculated)

35199.5 Da

IEP (calculated)

5.264

GRAVY (calculated)

-0.178

Length

307 amino acids

Sequence
(BLAST)

001: MDYELYRVVE KSPCGRYIRY DQLLGGGASK EVYIGWDRVQ QVEIAWNQIV YYEDDEKLFA EEATLLKSLN HERIIKCYHY WFDSESKILN MITELFPSGS
101: LKKYIHNGVG VGVDLVSIKN WGRQILQGLC FLHSQSPKII HRDIKCDNVL VASDGKQVTL GDFGLAVRIM DGDFVKEKEA KGTPEFMAPE CYDGEYNELV
201: DVYSFGMCLL EMVTGEYPFM ECSNQMHIFK KVYTGVKPVS LGKVKDYRVK DIIEKCMLPM SVRPSAEELL KDPFFLYNSG SSTFEACAPV DNILTSRAMD
301: IRHLYLV

Best Arabidopsis Sequence Match ( AT1G49160.2 )
(BLAST)

001: MEGSEDASAI VEPPDPEVLE IDPTCRYIRY KEVIGKGASK TVFKGFDEVD GIEVAWNQVR IDDLLQSPDC LERLYSEVRL LKSLKHKNII RFYNSWIDDK
101: NKTVNIITEL FTSGSLRQYR KKHRKVNMKA VKCWARQILT GLKYLHSQDP PIIHRDIKCD NIFINGNHGE VKIGDLGLAT VMEQANAKSV IGTPEFMAPE
201: LYDENYNELA DIYSFGMCML EMVTFEYPYC ECRNSAQIYK KVSSGIKPAS LSKVKDPEVM KFIEKCLLPA SERLSAEELL LDSFLNVNGL VMNNPLPLPD
301: IVMPKEGSFG ERCLMSEGPP NARNRTMSMN LDEDNNLPIV ISSNNSGTNC IEVRRAKRGN FFVLKGEEND ENSVSLILRI VDENGRVRNI HFLFFQEGDT
401: ASNVSSEMVE QLELTDKNVK FIAELIDVLL VNLIPNWKTD VAVDHLIHPQ QNQSSKDNHQ NGASSQAGES ISHSLSSDYC PRSDDEANPT VAATTEDQEA
501: EKPGSLEEEE EDERLKEELE KIEERFREEM KEITRKREEA TMETKNRFFE KKMQQVE

Arabidopsis Description

WNK7Protein kinase superfamily protein [Source:TAIR;Acc:AT1G49160]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.