Factsheet for PGSC0003DMT400057980

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g097840.2.1	Tomato	cytosol	97.19	97.19
CDY72128	Canola	cytosol	40.64	72.73
Bra009990.1-P	Field mustard	cytosol	43.72	71.09
CDX80684	Canola	cytosol	44.12	69.47
CDX86190	Canola	cytosol	43.85	69.05
Bra036118.1-P	Field mustard	cytosol	41.18	68.75
CDY72029	Canola	cytosol	39.71	68.43
VIT_14s0030g01660.t01	Wine grape	cytosol	65.64	67.91
AT5G28080.2	Thale cress	cytosol	43.98	66.87
CDY59818	Canola	cytosol	42.91	66.74
GSMUA_Achr6P29650_001	Banana	cytosol	39.97	66.59
KRH34065	Soybean	cytosol	64.44	65.31
KRG92737	Soybean	cytosol	64.3	65.18
Bra001129.1-P	Field mustard	cytosol	57.09	64.6
CDX74162	Canola	cytosol	57.09	64.5
CDY40685	Canola	cytosol	56.95	64.35
CDY00011	Canola	cytosol	42.91	62.7
CDY41908	Canola	cytosol	55.48	62.59
KRH68708	Soybean	cytosol	60.83	61.99
GSMUA_Achr9P25350_001	Banana	cytosol	44.65	61.74
CDY50765	Canola	cytosol	55.75	61.5
Bra040414.1-P	Field mustard	cytosol	55.75	61.5
KRG96945	Soybean	cytosol	56.02	61.44
GSMUA_Achr8P15460_001	Banana	cytosol	50.13	61.37
AT3G04910.1	Thale cress	cytosol	56.82	60.71
PGSC0003DMT400077354	Potato	cytosol	59.09	60.47
PGSC0003DMT400057113	Potato	cytosol	24.06	58.82
PGSC0003DMT400077830	Potato	cytosol	22.33	56.8
PGSC0003DMT400015698	Potato	cytosol	21.93	56.55
EER97416	Sorghum	cytosol	51.34	54.62
Os07t0572800-01	Rice	cytosol	51.2	54.4
Zm00001d006644_P002	Maize	cytosol	50.27	53.49
Zm00001d021875_P002	Maize	cytosol	50.27	53.33
TraesCS2D01G203900.2	Wheat	cytosol	49.2	52.35
TraesCS2B01G223600.1	Wheat	cytosol	49.06	52.2
TraesCS2A01G195900.2	Wheat	cytosol	48.8	52.07
GSMUA_Achr9P11110_001	Banana	cytosol, nucleus, peroxisome	51.74	50.52
HORVU2Hr1G037990.5	Barley	cytosol	45.99	50.44
PGSC0003DMT400086606	Potato	cytosol	18.32	44.63
PGSC0003DMT400058754	Potato	cytosol	18.85	43.52
PGSC0003DMT400011279	Potato	cytosol	34.22	42.95
PGSC0003DMT400097683	Potato	cytosol	18.98	42.01
PGSC0003DMT400078269	Potato	cytosol	35.56	41.89
PGSC0003DMT400046841	Potato	nucleus	39.3	41.41
PGSC0003DMT400031918	Potato	cytosol	31.68	40.24
PGSC0003DMT400000351	Potato	plastid	31.82	34.39
PGSC0003DMT400069406	Potato	cytosol	19.25	31.79
PGSC0003DMT400048610	Potato	nucleus	14.17	23.56

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:102599481	MapMan:18.4.2.4	Gene3D:3.10.20.90	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:Kinase_OSR1/WNK_CCT	UniProt:M1C1X6	PFAM:PF00069
PFAM:PF12202	EnsemblPlantsGene:PGSC0003DMG400022507	PGSC:PGSC0003DMG400022507	EnsemblPlants:PGSC0003DMT400057980	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR13902	PANTHER:PTHR13902:SF105	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0002951E46	RefSeq:XP_006347798.1	SEG:seg	:	:	:

Description

With no lysine kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400022507]

Coordinates

chr1:+:75508655..75512302

Molecular Weight (calculated)

85141.1 Da

IEP (calculated)

5.393

GRAVY (calculated)

-0.624

Length

748 amino acids

Sequence
(BLAST)

001: MNGLTDTEPE ISEFVEVDPT GRYGRYNEIL GKGASKTVYR AFDEYEGIEV AWNQVKLYDF LQSPEDLERL YCEIHLLKTL KHKNIMTFYT SWVDPANRNI
101: NFVTEMFTSG TLRQYRLKHK RVNIRAVKRW CRQILNGLLY LHSHDPPVIH RDLKCDNIFI NGNQGEVKIG DLGLAAILRK SHAAHCVGTP EFMAPEVYEE
201: EYNELVDIYS FGMCILEMVT FEYPYSECTH PAQIYKKVMS GKKPDALYQV KDPEIRQFVE KCLATVSLRL SARELLDDPF LQIDDSESDL RHTESRRELD
301: YMNPLLRKPV LGLDYEGKSF GNGAYNDYGF DDIHEWASDP NEYEQTGIEL FEYNDDEHDE HSADLDITIK GKRREDGSIF LRLRIADKEG RIRNIYFPFD
401: VEYDTALTVA TEMVSELDIT DQDVTKIADM IDGEISKLEP DWKPGPGIVE TPRFANSSFC HNCSSNNSSI GSFMNFLSKN PATQNLQLAE CNGCAATHGR
501: FEEVTYQSNS PRPITSTCSD EPASSSHING VHYNLFKMNG FHHTEIWDRH ESFECSSVGS EESHFLEEGE KLYHDPSTEG QKEAGPKSEL TSGVKNLGRS
601: LSNPRSLGEI PAPYEISEYE HLIEQEMRWL KANYQIKLRE LKDQHLGLPP KASKPPTGSS KRKKKTKNRN SCLETLLKSS DCGKTISSES NGLSCPISVS
701: QRARKCEAMK GSPNVRDMVS TAKSFFTRTL LPNSLHRTTS LPVDAVDI

Best Arabidopsis Sequence Match ( AT3G04910.1 )
(BLAST)

001: MNNLSYLEPD YSEFVEVDPT GRYGRYNEVL GKGASKTVYR AFDEYEGIEV AWNQVKLYDF LQSPEDLERL YCEIHLLKTL KHKNIMKFYT SWVDTANRNI
101: NFVTELFTSG TLRQYRLRHK RVNIRAMKHW CRQILRGLHY LHSHDPPVIH RDLKCDNIFV NGNQGEVKIG DLGLAAILRK SHAAHCVGTP EFMAPEVYEE
201: AYNELVDIYS FGMCILEMVT FDYPYSECTH PAQIYKKVMS GKKPDALYKV KDPEVKCFIE KCLATVSLRV SARELLDDPF LRIDDGEFDL RSVDMEDSVG
301: PLYRQPHHLP DYYNYPSNSS SLNRQYSNGN YPSNSSSLNR QYSNGYNSHH EYQNGWAYNP AETEETHGIE LFESRNNDDQ EEEKKSGNVD ITIKGKRRDD
401: GGLFLRLRIA DKEGRVRNIY FPFDIETDTA LSVATEMVAE LDMDDHGVTK IANMIDGEIS SLVPSWRPGP EFEECLAAAA AANAASICNN CVSNRTSMGS
501: VMDFLRTNPG ANVIQCCRNG CGETHGRFEE ITIRETEVRL RELWKLQQQQ ESRELSSIDS GHNHSEEEEE EEVLYEDPEN MFSCEAGNEI NHISGSGSFS
601: FMPSKYCDEP SEKTENQVQQ ELRWLKAKCQ IELRDIQDEQ LKTRWPESGE EVEISPKDGF LGSVSGLGRE EDTVKEMFGE RLVPKCLKRT TSLPVDAIDS

Arabidopsis Description

WNK1Serine/threonine-protein kinase WNK1 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAV6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.