Factsheet for PGSC0003DMT400000351

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g096170.2.1	Tomato	plastid	96.53	87.09
GSMUA_Achr2P11890_001	Banana	cytosol	44.94	56.96
VIT_15s0046g00100.t01	Wine grape	cytosol	51.59	56.4
GSMUA_Achr4P29110_001	Banana	cytosol	46.24	55.94
GSMUA_Achr1P03970_001	Banana	cytosol	46.39	52.54
PGSC0003DMT400015698	Potato	cytosol	21.97	52.41
KRH06435	Soybean	cytosol	51.01	52.37
PGSC0003DMT400048610	Potato	nucleus	33.96	52.22
PGSC0003DMT400077830	Potato	cytosol	21.68	51.02
PGSC0003DMT400057113	Potato	cytosol	22.54	50.98
KRH47870	Soybean	endoplasmic reticulum, plasma membrane	51.59	50.28
Os02t0672800-01	Rice	cytosol	44.08	49.84
EES05742	Sorghum	cytosol	43.35	49.1
TraesCS6D01G236400.1	Wheat	cytosol, nucleus, plastid	43.06	48.38
TraesCS6B01G270400.1	Wheat	cytosol, nucleus, plastid	43.06	48.3
TraesCS6A01G255100.2	Wheat	cytosol, nucleus, plastid	42.77	48.05
HORVU6Hr1G065020.2	Barley	cytosol, nucleus, plastid	42.49	47.57
PGSC0003DMT400086606	Potato	cytosol	21.1	47.56
PGSC0003DMT400031918	Potato	cytosol	40.17	47.2
PGSC0003DMT400058754	Potato	cytosol	21.97	46.91
Zm00001d051431_P002	Maize	mitochondrion	37.28	44.56
PGSC0003DMT400097683	Potato	cytosol	21.24	43.49
Zm00001d017568_P002	Maize	plastid	41.33	40.97
PGSC0003DMT400011279	Potato	cytosol	31.21	36.24
PGSC0003DMT400046841	Potato	nucleus	35.55	34.65
PGSC0003DMT400078269	Potato	cytosol	31.5	34.33
PGSC0003DMT400077354	Potato	cytosol	33.96	32.15
PGSC0003DMT400057980	Potato	cytosol	34.39	31.82
PGSC0003DMT400069406	Potato	cytosol	17.77	27.15

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.4	Gene3D:3.10.20.90	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0ZGK9	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400000122	PGSC:PGSC0003DMG400000122
EnsemblPlants:PGSC0003DMT400000351	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR13902	PANTHER:PTHR13902:SF107	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00029544F1	SEG:seg	:

Description

Kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400000122]

Coordinates

chr1:+:73733766..73738226

Molecular Weight (calculated)

77443.8 Da

IEP (calculated)

6.213

GRAVY (calculated)

-0.432

Length

692 amino acids

Sequence
(BLAST)

001: MSFGVGSGSS YHSGNGFGVG SPLRRSSSNK GGFLGSSANE RPAHQVDYVE KDPKGRYVRY SEVLGKGAFK TVYKAFDLLD GIEVAWSRVK VEDVLQSPDD
101: LGKLYAEIHI LKQLKHDNIM KFCDSWVDDK KRTVNMITEL FTSGNLRQYR KKYRSVDMKA IKTWARQILQ GLDYLHSQNP PIIHRDLKCD NIFVNGNHGE
201: IKIGDLGLAT IMEQPTVKSV IGTPEFMAPE LYEEEYNELV DIYSFGMCML ELVTFEYPYS ECKNPAQIFK KVSSGVKPAS LGKVTDPQIK EFIEKCLVPA
301: SQRLPAKDLL KDPFLQLENL NGPIHSLLQS PYQSPRSLSS LKSAPHSMDV DSDCNQSVCT DSHCGSPCAP TLEFQRFHQN NEFKLTGKKN DENSVSLTLR
401: IKSPSGRVRN IHFNFYLYTD TALLVAAEMV DQLKLDDHDV DFIADFIDYL IMKIVPSWKP SDYYSSGGRS QREEALQNYL TLSPLPTTSN ARQDDNIPVL
501: NMNNQTSSTT HQVDEDKLYA NSNGTSCRVT FASPSHLASV IDGESVASEV MGKISSLKNS FGFGDYFTCA EVISKGSSGN LSELDFMGLF HDECKSQGNG
601: GDYVECMLTN GFGKNLEVTL TDTNRASKCM SLSGNCSFLS LVSKDEESEL KLELDTIESL YRQCYQELSR MKLEALEACR KRWITKKKLA CN

Best Arabidopsis Sequence Match ( AT3G18750.5 )
(BLAST)

001: MEGTDDASAL QEPPDPEVLE VDPTFRYIRY KEVIGKGAFK TVYKAFDEVD GIEVAWNQVR IDDVLQSPNC LERLYSEVRL LKSLKHNNII RFYNSWIDDK
101: NKTVNIITEL FTSGSLRHYR KKHRKVNMKA VKNWARQILM GLRYLHGQEP PIIHRDLKCD NIFINGNHGE VKIGDLGLAT VMEQANAKSV IGTPEFMAPE
201: LYDENYNELA DIYSFGMCML EMVTFDYPYC ECKNSAQIYK KVSSGIKPAS LSRVKDPEVK QFIEKCLLPA SERLSAKELL LDPFLQLNGL TMNNPLPLPD
301: IVMPKEGAFG DRCLMSEGPP TTRPSKTLSI DLDEDSNLPI VTFSDNSGSR CIEVRRAKRG NFFVLKGEEN DEQSVSLILR IVDENGRVRN IHFLFYQEGD
401: TASKVSSEMV EQLELTDQNV TFIAELIDIL LVNMIPTWKT DVTVDHLIHS QLNQNSRSHH NEAKPQKQEE TVFHDTCELV SHSCNSDCPR SDEEDKQCVD
501: ATKGEDKSSI QEVEEATEPV SLEEEERLRQ ELEEIEAKYQ EDMKEIATKR EEAIMETKKK LSLMKLK

Arabidopsis Description

WNK6Probable serine/threonine-protein kinase WNK6 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8Y8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.