Factsheet for PGSC0003DMT400031918

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400031918

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G41990.1	PGSC0003DMT400031918	AT5G41990.1	16427632

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g082980.2.1	Tomato	cytosol	94.57	95.05
PGSC0003DMT400057113	Potato	cytosol	27.67	53.27
PGSC0003DMT400015698	Potato	cytosol	26.15	53.1
PGSC0003DMT400077830	Potato	cytosol	26.32	52.72
CDX67520	Canola	nucleus	47.54	52.14
AT1G64630.1	Thale cress	cytosol	46.18	51.91
CDY13374	Canola	nucleus	47.88	50.9
Bra028518.1-P	Field mustard	nucleus	47.71	50.63
AT5G41990.1	Thale cress	cytosol	48.22	50.44
VIT_02s0025g02360.t01	Wine grape	nucleus	54.16	49.23
PGSC0003DMT400086606	Potato	cytosol	25.47	48.86
VIT_17s0053g01080.t01	Wine grape	cytosol, vacuole	14.94	47.83
PGSC0003DMT400058754	Potato	cytosol	25.64	46.6
KRG90091	Soybean	cytosol	47.88	45.63
KRH17593	Soybean	cytosol	47.71	45.47
PGSC0003DMT400097683	Potato	cytosol	24.79	43.2
PGSC0003DMT400000351	Potato	plastid	47.2	40.17
PGSC0003DMT400011279	Potato	cytosol	34.13	33.72
PGSC0003DMT400046841	Potato	nucleus	39.9	33.1
PGSC0003DMT400078269	Potato	cytosol	35.14	32.6
PGSC0003DMT400077354	Potato	cytosol	39.73	32.01
PGSC0003DMT400057980	Potato	cytosol	40.24	31.68
PGSC0003DMT400048610	Potato	nucleus	22.58	29.56
PGSC0003DMT400069406	Potato	cytosol	20.2	26.27

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102594076	MapMan:18.4.2.4	Gene3D:3.10.20.90	Gene3D:3.30.200.20	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1AWH6	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG402012244
PGSC:PGSC0003DMG402012244	EnsemblPlants:PGSC0003DMT400031918	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR13902	PANTHER:PTHR13902:SF107
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002954099	RefSeq:XP_006343796.1
SEG:seg	:	:	:	:	:

Description

Kinase [Source:PGSC_GENE;Acc:PGSC0003DMG402012244]

Coordinates

chr8:+:56532503..56536101

Molecular Weight (calculated)

66206.3 Da

IEP (calculated)

5.078

GRAVY (calculated)

-0.349

Length

589 amino acids

Sequence
(BLAST)

001: MNSASSWFEK VKLDEPEIVE VSPDERYIRY SEILGSGAFK TVYKAFDNID GIEVAWNQIC IDDALQSPEH LERTYSEVHL LKMLKNENII KLYTSWVDDV
101: NKSINMITEL FSSGSLRHYR KRHKTVDTKA IKHWARQILQ GLHYLHSHNP PVIHRDLKCD NIFINGNHGE VKLGDLGLAT IMEQPTVRSV IGTPEFMAPE
201: LYDEEYNELV DIYSFGMCIL ELITCEYPYN ECRNQAQIYK KVTSGIKPAS LAKIADPHVK QFVEKCLAPV SVRLSAAELL EDPFLSSESL KNPVCDHLQP
301: TNFVPGAQSL PKSIFMDVDL AQNLHSDMSI ENKTASPHFS NLDIVRRNGR NEFRLQGDKH DDRSIVFSLR IAELTGRIRH VHFVFCIDAD TVMSIASEMA
401: EELELPNDDV ATIAELITDV IFKLSTSQKY SFGSSSAVNN SSDDSTLIIE DHIIGEGITS LNQGIASTSD VEYNNVLRSL GNESDNINVP KIHTLSNSKG
501: SLGDAVMSDC TTKTSGISFD SLLNVISNDF SSNSLINGAN DKNQLQDLKS ELDAIDMQYQ QSCHELSRMR EEAIENARKK WTGKKKICT

Best Arabidopsis Sequence Match ( AT5G41990.1 )
(BLAST)

001: MASGSGFLGQ ISSMEEADFA EKDPSGRYIR YDDVLGRGAF KTVYKAFDEV DGIEVAWNLV SIEDVMQMPG QLERLYSEVH LLKALKHENI IKLFYSWVDE
101: KNKTINMITE LFTSGSLRVY RKKHRKVDPK AIKNWARQIL KGLNYLHSQN PPVIHRDLKC DNIFVNGNTG EVKIGDLGLA TVLQQPTARS VIGTPEFMAP
201: ELYEEEYNEL VDIYSFGMCM LEMVTCEYPY NECRNQAQIY KKVTSNIKPQ SLGKVDDPQV RQFIEKCLLP ASSRPTALEL SKDPFLARDG GKDSALLASS
301: STSSKYVRPP QLEHLPMDVD HNENKSVSSN EDYPWSQTIE LQRIAENKEF RLRGERSDDV TASMVLRIAD PSGKCRIVHF AFYLESDTAT AIAEEMVEEL
401: HLTSQEVVVI ADMIDDFIMQ LLSDRTSSHH NQNSPRLTHE DHEAANQQTV NSKDEEAAGQ SMKSDISADY YFPYSANDGN AAMEAGRDAE SMSSYLDSCS
501: MMSTIYNLSI SDNDYPEDLK TELNLIESQF NQSFQDLLKL KEDAIENAKR KWITKKQKAV NIS

Arabidopsis Description

WNK8Serine/threonine-protein kinase WNK8 [Source:UniProtKB/Swiss-Prot;Acc:Q944Q0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.