Factsheet for VIT_02s0025g02360.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0136g00340.t01	Wine grape	cytosol	35.65	74.52
VIT_10s0116g00480.t01	Wine grape	cytosol	43.21	67.15
VIT_17s0053g01080.t01	Wine grape	cytosol, vacuole	16.51	58.15
VIT_19s0090g01690.t01	Wine grape	cytosol	26.08	56.9
VIT_15s0046g00100.t01	Wine grape	cytosol	55.4	56.71
Solyc08g082980.2.1	Tomato	cytosol	49.38	54.61
PGSC0003DMT400031918	Potato	cytosol	49.23	54.16
VIT_12s0057g00520.t01	Wine grape	cytosol, plastid	25.0	48.07
VIT_04s0044g00850.t01	Wine grape	cytosol	46.14	42.96
VIT_17s0000g09380.t01	Wine grape	nucleus	40.12	38.86
VIT_06s0004g07920.t01	Wine grape	cytosol	35.49	36.45
VIT_05s0020g03380.t01	Wine grape	cytosol	39.97	35.43
VIT_14s0030g01660.t01	Wine grape	cytosol	39.04	34.99
VIT_08s0058g01130.t01	Wine grape	cytosol	33.8	34.98

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100246117	wikigene:100246117	MapMan:18.4.2.4	Gene3D:3.10.20.90	Gene3D:3.30.200.20
EMBL:AM475793	ProteinID:CAN70702	ProteinID:CAN70702.1	ProteinID:CCB58287	ProteinID:CCB58287.1	UniProt:F6HU64
EMBL:FN596251	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100246117	wikigene:LOC100246117	PFAM:PF00069	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR13902	PANTHER:PTHR13902:SF107	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000210995D	ArrayExpress:VIT_02s0025g02360	EnsemblPlantsGene:VIT_02s0025g02360	EnsemblPlants:VIT_02s0025g02360.t01	RefSeq:XP_002273005
RefSeq:XP_002273005.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2:+:2095996..2099570

Molecular Weight (calculated)

72921.0 Da

IEP (calculated)

4.762

GRAVY (calculated)

-0.470

Length

648 amino acids

Sequence
(BLAST)

001: MNSDKFETDD SDFEEKDPTG RYVRYNEFLG KGAFKTVYKA FDEVDGIEVA WGQVEIEDLL QSPQQLERLY SEVHLLKSLK HDNIIKFYNS WVDDTNKTIN
101: LITELFTSGS LRQYRKKHKN VDLKAIKNWA KQILRGLHYL HSHNPPIIHR DLKCDNIFVN GNNGEVKIGD LGLAIVMQQP TARSVIGTPE FMAPELYEEE
201: YNELVDIYSF GMCILELVTC EYPYNECKNP AQIYKKVSSG IKPASLGKVS DPQVKQFIEK CLVPASLRLS AQELLKDAFF ATENSKEPLS VSTHKSSVDD
301: SLQSSNFMPN LMNLPKPELQ PMDMDPNYKK LSVSTHMKSI SGTPHFRALQ FERFNKNNLF KLRGEKIDDN SISMTLHIAD PCGRAKNIHF AFYLDSDTAL
401: SIAGEMVEQL DLYNEDVAVI AELIDVMISE LVPTWKPAFE SMLCGANSSC EDSLVLHNGG TSLRHPSDSG SAKGTSDAVT EHLISLSANG EEQSTVESAL
501: SGMSTKDDAT VASDANDIKS LECPDDECYE ASDRCCFNGD RQVLDHERHK EGRYNGNIGE PVAMNGFTKD WEISCIESCS GMSNSLSLSS ICSLSLADKD
601: PSDELKLEVD TIDTQYHQCF QELLRMREEA IEKAKNRWIT KSRYQPLL

Best Arabidopsis Sequence Match ( AT5G41990.1 )
(BLAST)

001: MASGSGFLGQ ISSMEEADFA EKDPSGRYIR YDDVLGRGAF KTVYKAFDEV DGIEVAWNLV SIEDVMQMPG QLERLYSEVH LLKALKHENI IKLFYSWVDE
101: KNKTINMITE LFTSGSLRVY RKKHRKVDPK AIKNWARQIL KGLNYLHSQN PPVIHRDLKC DNIFVNGNTG EVKIGDLGLA TVLQQPTARS VIGTPEFMAP
201: ELYEEEYNEL VDIYSFGMCM LEMVTCEYPY NECRNQAQIY KKVTSNIKPQ SLGKVDDPQV RQFIEKCLLP ASSRPTALEL SKDPFLARDG GKDSALLASS
301: STSSKYVRPP QLEHLPMDVD HNENKSVSSN EDYPWSQTIE LQRIAENKEF RLRGERSDDV TASMVLRIAD PSGKCRIVHF AFYLESDTAT AIAEEMVEEL
401: HLTSQEVVVI ADMIDDFIMQ LLSDRTSSHH NQNSPRLTHE DHEAANQQTV NSKDEEAAGQ SMKSDISADY YFPYSANDGN AAMEAGRDAE SMSSYLDSCS
501: MMSTIYNLSI SDNDYPEDLK TELNLIESQF NQSFQDLLKL KEDAIENAKR KWITKKQKAV NIS

Arabidopsis Description

WNK8Serine/threonine-protein kinase WNK8 [Source:UniProtKB/Swiss-Prot;Acc:Q944Q0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.