Factsheet for VIT_12s0057g00520.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 4
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74023	Soybean	cytosol	70.33	79.8
KRH14100	Soybean	cytoskeleton, cytosol, nucleus	69.73	79.12
VIT_19s0090g01690.t01	Wine grape	cytosol	67.95	77.1
GSMUA_Achr2P06570_001	Banana	cytosol	45.99	76.35
Solyc07g047990.1.1	Tomato	cytosol	62.31	72.41
PGSC0003DMT400015698	Potato	cytosol	62.02	72.07
GSMUA_Achr1P22760_001	Banana	cytosol	53.41	71.43
PGSC0003DMT400077830	Potato	cytosol	61.13	70.07
GSMUA_Achr1P12650_001	Banana	cytosol	54.9	69.03
EER97450	Sorghum	cytosol	56.97	59.63
TraesCS2D01G197600.1	Wheat	mitochondrion	56.38	59.56
Os07t0584100-01	Rice	cytosol	57.57	59.33
TraesCS2B01G216800.1	Wheat	mitochondrion	56.38	59.01
Zm00001d021948_P001	Maize	cytosol	56.08	58.33
TraesCS2A01G190200.1	Wheat	mitochondrion	56.08	58.33
Solyc05g041420.2.1	Tomato	golgi, plastid, vacuole	61.72	57.46
TraesCS3A01G240400.1	Wheat	cytosol	22.85	55.8
HORVU2Hr1G036210.2	Barley	plastid	55.79	53.56
TraesCS5A01G315400.1	Wheat	cytosol	24.93	51.85
TraesCS3A01G193000.1	Wheat	cytosol	24.63	51.23
TraesCS3B01G460100.1	Wheat	cytosol	24.33	50.62
VIT_10s0116g00480.t01	Wine grape	cytosol	48.37	39.09
VIT_17s0053g01080.t01	Wine grape	cytosol, vacuole	20.47	37.5
VIT_17s0000g09380.t01	Wine grape	nucleus	54.3	27.35
VIT_06s0004g07920.t01	Wine grape	cytosol	47.77	25.52
VIT_15s0046g00100.t01	Wine grape	cytosol	47.48	25.28
VIT_02s0025g02360.t01	Wine grape	nucleus	48.07	25.0
VIT_08s0058g01130.t01	Wine grape	cytosol	45.4	24.44
VIT_04s0044g00850.t01	Wine grape	cytosol	49.26	23.85
VIT_14s0030g01660.t01	Wine grape	cytosol	51.04	23.79
VIT_05s0020g03380.t01	Wine grape	cytosol	51.34	23.67
VIT_05s0136g00340.t01	Wine grape	cytosol	0.3	0.32

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100259620	wikigene:100259620	MapMan:18.4.2.4	Gene3D:3.30.200.20	ProteinID:CCB51711
ProteinID:CCB51711.1	UniProt:F6HHL5	EMBL:FN595759	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100259620	wikigene:LOC100259620
PFAM:PF00069	PIRSF:PIRSF000654	PFscan:PS50011	PANTHER:PTHR13902	PANTHER:PTHR13902:SF60	InterPro:Prot_kinase_dom
SUPFAM:SSF56112	TIGR:TC56156	UniParc:UPI0002108A9F	ArrayExpress:VIT_12s0057g00520	EnsemblPlantsGene:VIT_12s0057g00520	EnsemblPlants:VIT_12s0057g00520.t01
unigene:Vvi.9926	RefSeq:XP_002270768	RefSeq:XP_002270768.2	SEG:seg	:	:

Description

No Description!

Coordinates

chr12:-:9089400..9092133

Molecular Weight (calculated)

37880.1 Da

IEP (calculated)

5.395

GRAVY (calculated)

-0.253

Length

337 amino acids

Sequence
(BLAST)

001: MQAIVSSTGD WILTCQTGCV DFWLLSVNSI SSSSSKMPSA SLNSSDHDTE PFVEVDPTGR YGRYSDLLGH GAVKKVYRAF DQEEGIEVAW NQVQLRNFSE
101: DKSMVDRLHS EVKLLSTLKN ESIIVLYSVW KDNEHNTLNF ITEVCTSGNL RDYRKRHRHV SIKALKKWSR QVLKGLEYLH THDPCIIHRD LNCSNIFING
201: NIGQVKIGDL GLAAIVGKNH LAHSVLGTPE YMAPELYEED YTEMVDIYSF GMCLLEMVTM EIPYSECDNI AKIYKKVTSG VGPLAMNKVS DPEVKFFIEK
301: CIAQPRARPS ASELLNDPFF SELNDGDATI IDGQAIQ

Best Arabidopsis Sequence Match ( AT5G55560.1 )
(BLAST)

001: MMTCASSDDN ESEKDKDSES FVEVDPTGRY GRYGELLGSG AVKKVYRAFD QEEGIEVAWN QVKLRCFSDD PAMTERLYSE VRLLKNLKNS NIITLYKVWR
101: DERNNTLNFI TEICTSGNLR EYRKKHRHVS MRALKKWSKQ ILKGLDYLHT HDPCIIHRDL NCSNIFVNGN IGQVKIGDLG LAAIVGKNHL AHSILGTPEF
201: MAPELYEENY TEMVDIYSYG MCVLELVSLE IPYSECDSVA KIYKRVSKGL KPEALNKVND PEAKAFIEKC IAQPRARPSA AELLCDPFFD GILDDDDEDG
301: ENNDNNGAGR IVVS

Arabidopsis Description

WNK11Probable serine/threonine-protein kinase WNK11 [Source:UniProtKB/Swiss-Prot;Acc:Q6ICW6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.