Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d021948_P001 Maize cytosol 97.52 96.91
Os07t0584100-01 Rice cytosol 82.92 81.65
TraesCS2D01G197600.1 Wheat mitochondrion 78.26 79.0
TraesCS2A01G190200.1 Wheat mitochondrion 78.26 77.78
TraesCS2B01G216800.1 Wheat mitochondrion 77.64 77.64
TraesCS3A01G240400.1 Wheat cytosol 31.37 73.19
HORVU2Hr1G036210.2 Barley plastid 77.95 71.51
GSMUA_Achr2P06570_001 Banana cytosol 43.17 68.47
KRH14280 Soybean cytosol 62.11 66.89
TraesCS3B01G460100.1 Wheat cytosol 33.54 66.67
KRH73862 Soybean cytosol 62.11 66.67
TraesCS3A01G193000.1 Wheat cytosol 33.23 66.05
TraesCS5A01G315400.1 Wheat cytosol 33.23 66.05
KRG98571 Soybean cytosol 61.18 65.89
KRH46299 Soybean cytosol 60.87 65.55
KRH74023 Soybean cytosol 59.01 63.97
CDY36754 Canola cytosol 60.56 63.93
CDY11988 Canola cytosol 60.56 63.73
Bra028972.1-P Field mustard cytosol 60.25 63.61
KRH14100 Soybean cytoskeleton, cytosol, nucleus 58.39 63.3
GSMUA_Achr1P22760_001 Banana cytosol 49.38 63.1
Solyc07g065250.2.1 Tomato cytosol 58.7 62.17
PGSC0003DMT400057113 Potato cytosol 59.01 62.09
GSMUA_Achr1P12650_001 Banana cytosol 51.55 61.94
AT5G55560.1 Thale cress cytosol 60.25 61.78
VIT_19s0090g01690.t01 Wine grape cytosol 56.83 61.62
CDY17333 Canola cytosol, nucleus, plastid 58.7 61.36
Bra002897.1-P Field mustard cytosol 58.07 60.91
CDY06573 Canola cytosol 58.39 60.84
CDY45665 Canola cytosol, nucleus, plastid 58.39 60.84
Bra035577.1-P Field mustard cytosol 58.07 60.32
CDY20759 Canola cytosol 58.07 60.32
PGSC0003DMT400077830 Potato cytosol 54.04 59.18
Solyc07g047990.1.1 Tomato cytosol 52.17 57.93
VIT_12s0057g00520.t01 Wine grape cytosol, plastid 59.63 56.97
PGSC0003DMT400015698 Potato cytosol 51.24 56.9
Solyc05g041420.2.1 Tomato golgi, plastid, vacuole 53.73 47.79
CDY29791 Canola cytosol 40.06 43.43
EES16694 Sorghum cytosol 43.79 34.06
EES09315 Sorghum cytosol 43.79 31.13
EES17554 Sorghum nucleus 50.62 25.23
EES05742 Sorghum cytosol 47.52 25.04
OQU88579 Sorghum cytosol 47.2 24.72
EER97416 Sorghum cytosol 48.76 22.33
EES09126 Sorghum mitochondrion 48.76 22.18
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.2.4Gene3D:3.30.200.20EntrezGene:8078962UniProt:C5XCH5EnsemblPlants:EER97450
ProteinID:EER97450ProteinID:EER97450.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005829GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
GO:GO:0035556InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069PIRSF:PIRSF000654PFscan:PS50011
PANTHER:PTHR13902PANTHER:PTHR13902:SF44InterPro:Prot_kinase_domEnsemblPlantsGene:SORBI_3002G355100SUPFAM:SSF56112unigene:Sbi.6756
UniParc:UPI0001A837C2RefSeq:XP_002460929.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr2:+:71831762..71833814
Molecular Weight (calculated)
35971.9 Da
IEP (calculated)
6.391
GRAVY (calculated)
-0.266
Length
322 amino acids
Sequence
(BLAST)
001: MAVDRVDGEE AFEEVDPTGR FGRYADVLGL GSVKKVYRGF DQEEGIEVAW NRVRLRALAD RDPGMVDRLH AEVRLLRSLS HDHIIGFHKV WLDRDAGVLN
101: FITEVCTSGS LREYRHRHRH VSVKALKKWA RQILEGLNHL HTHDPCIIHR DLNCSNVFIN GNNGQVKIGD LGLAAIVDKT HVAHTILGTP EFMAPELYTE
201: TYTESVDIYS YGMCVLEMVT REVPYAECGS VVQIFHNVTR GVPPAALKRL KDPELRGFIE RCIGQPRNRP SAAELLQDPF FNGIRGGDDD DALADACSVV
301: AGAPAVPRPR SYVDDLAGLR LD
Best Arabidopsis Sequence Match ( AT5G55560.1 )
(BLAST)
001: MMTCASSDDN ESEKDKDSES FVEVDPTGRY GRYGELLGSG AVKKVYRAFD QEEGIEVAWN QVKLRCFSDD PAMTERLYSE VRLLKNLKNS NIITLYKVWR
101: DERNNTLNFI TEICTSGNLR EYRKKHRHVS MRALKKWSKQ ILKGLDYLHT HDPCIIHRDL NCSNIFVNGN IGQVKIGDLG LAAIVGKNHL AHSILGTPEF
201: MAPELYEENY TEMVDIYSYG MCVLELVSLE IPYSECDSVA KIYKRVSKGL KPEALNKVND PEAKAFIEKC IAQPRARPSA AELLCDPFFD GILDDDDEDG
301: ENNDNNGAGR IVVS
Arabidopsis Description
WNK11Probable serine/threonine-protein kinase WNK11 [Source:UniProtKB/Swiss-Prot;Acc:Q6ICW6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.